Tremella mesenterica: TREMEDRAFT_38091
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Entry
TREMEDRAFT_38091 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11293
protein HIRA/HIR1
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_38091
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
TREMEDRAFT_38091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
Hira
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
18492928
NCBI-ProteinID:
XP_007002514
JGI:
Treme1_38091
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MRVTKPAWVQHTVGEKKNSRCPIYSLSVHPDGTRLATGGLDQKVKIWSTLPILDEEASED
EANHKLLCTMTSHTGSVLTVRWAHHGRFLATGADDAVVMIWGIDPNGGGRLFGSDEVNVE
SWKPLTRLVGHQADIIDIAWSRDDTMLASVGLDSTIWIWDGRTFVERIRKLDSHKGFVKG
VTWDPVGNYLATQSDDKTVKIWNTEDWSLVTSVERPFENSPSSTFFRRLSWSPDGAFIAA
SNAMNGPVFVAAVIEREGWTADISFVGHENTIQVAAFNPCLFFQKGAEPTRLTASCMLAL
GADDFSISIWRNTVHKPLVVLHDIFGRNLMDLCWANDGLHLYGCSEDGTICAIAFDQSEF
PELATPDKTQLILDAYGYTPRRHNPRSLSAAPSLQSNGFAHLPSIQNPGHVNVLQPRKTK
PNPARRVGFANSNGSSLRPLPSGRSGSSSDPFSAPIQPLASSMVQSSTARMFQDAHQAFK
PTHDTYGSPRGAKRKTSLLDNAPFVNRGSPMGVSQPLGSVSELRLPRTTVIGTSASGTAQ
TGRTLPVPSVQNVLRAKAGDVHDETLYVEARNEVAGRCKVTYCQDGQDWWTDHVHCAVLG
MAMSTRLCALGLEDGGLKVYTPAGRQSFHVELGAPVSQMVAISNLVFLVTADCQARVYNV
ESRKLLHPVSSISHLLIDPLSSSSSASTIDILELRLCPNGVPVVITTSPAAYAFDPALQS
WTSICAPTHLTSTRTSSPSNVSRGPLADIESRLSSIDIRRDNGERPKGYDISVEINTLET
RISACVLLGSREEYKWWIMRYAEVLVKEGYVGRMDEFVRDLVGPIYHRPDRKEEWDPTIL
GLDKRELAREILNMGARSPTLRDMAQQWINTLDVIDSER
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagagttaccaaacccgcctgggtacaacataccgtgggggagaagaaaaactcgagg
tgtcctatttattccctttcagtacatcctgatgggactcgtttagcaacgggaggtcta
gaccaaaaagtcaaaatatggtcaacattgcctatactagatgaggaagcttcagaagat
gaggcgaatcacaaacttctttgcacgatgacatctcacacagggtctgtacttacggtg
agatgggcacaccatggcaggtttctagccacaggagcggatgatgcggtggtcatgatt
tggggaattgaccccaacggaggtggaagattgtttggctcagatgaagtcaatgtggaa
agctggaaacctttaactcgcctggtcggccatcaagcagacattatcgacatagcttgg
tcaagagacgataccatgctcgcttcggtcggattggacagtaccatctggatctgggac
gggcggactttcgtagagcgaatacggaaattagactcgcataaaggattcgtcaagggt
gtgacatgggatccagtggggaactatctcgccactcagtcggacgataaaacggtcaag
atttggaatactgaggattggtctttagtgacgagcgtcgagagaccatttgagaattcg
ccttcttccactttcttccgtcgacttagttggtctcccgacggcgctttcatagccgct
tcaaacgccatgaatggaccagtcttcgttgctgctgtgatcgagagggaagggtggaca
gccgatatctcgtttgttgggcatgaaaacactatacaagtcgctgcattcaacccatgt
ctcttcttccaaaaaggagcagaaccaacgcgactgacagcatcatgtatgcttgccctt
ggcgctgatgacttcagtatcagcatatggaggaacaccgtgcacaagccgcttgtggtt
cttcacgatatattcgggaggaatttgatggatttatgctgggccaatgatggtctgcat
ctttacggctgctccgaagacggtaccatttgcgccatcgcgtttgatcaatcagaattc
cccgaactcgccactcctgataagacccaactcatccttgacgcatatggttacacgcct
cgacgtcacaaccctcgatccctttctgccgctccctcacttcagtccaatggctttgct
caccttccttccatccaaaaccctggtcacgtcaatgtccttcaaccccgaaagaccaag
cccaaccctgcacgtagagttggattcgccaactccaacggctcgtccctccgtcctcta
ccttcaggaagatcaggatcctctagcgaccctttttccgctcctatccagcctcttgca
tcctccatggtccaatcatccactgccagaatgtttcaagacgctcaccaggcgttcaag
cccactcatgatacgtatggctcacctcgtggagcgaaacgaaagacctctttactcgac
aatgcccccttcgtcaatagaggaagtccgatgggtgtctcgcagcctctgggaagtgtt
tcggagctacggctccctcgcaccactgtaatcggtacaagcgcgtccgggactgctcaa
actggacgaacactacctgtgcctagtgttcaaaatgtgcttcgcgcaaaagcgggtgac
gtacacgatgaaacattatacgtggaagctcggaatgaagtggcggggagatgtaaggtc
acgtattgccaagacggacaagattggtggacggatcatgtacattgtgcggtgttgggt
atggcgatgagtacaaggttgtgcgcattgggattggaggatgggggtttgaaagtatac
actccggccggaagacaatcatttcacgtcgagttgggagctcctgtcagtcagatggta
gccatatcaaatctggtcttcttggtcaccgcggactgtcaagctcgtgtatataacgtc
gaatcccgtaaactcttacatcccgtttcttcaatatctcaccttctcatagatccccta
tcgtcatcttcctccgcttccactatcgacattctggaactccgtctctgtcccaacggc
gttcctgtggtaattaccacctctcctgccgcttacgcattcgacccagccttacaatca
tggacatccatctgtgctccgacgcatctcacatcgacgagaacatcctcaccgtcgaac
gtcagtcgtggtccattggcagatattgaatctaggttatcttccatcgatatcagacga
gataacggcgaaagaccaaagggatatgatatctctgtcgaaatcaatacgttggaaacg
cgcatcagtgcttgtgtgttgttggggagtagggaagagtataaatggtggattatgaga
tatgcagaggtgttggttaaggagggatatgtgggacggatggatgagtttgtcagggat
ctagttggacccatctatcatcgcccagaccggaaagaagagtgggatccaacaatacta
gggttggacaagcgggaattggcgagggagatattaaatatgggtgctcggtcaccaact
ttacgggatatggcacaacaatggataaacactttagacgtgattgattcagagagatga
DBGET
integrated database retrieval system