Tremella mesenterica: TREMEDRAFT_38178
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Entry
TREMEDRAFT_38178 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03260
translation initiation factor 4G
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_38178
03012 Translation factors [BR:
tms03012
]
TREMEDRAFT_38178
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
TREMEDRAFT_38178
mRNA cycle factors
Stress granule specific factors
TREMEDRAFT_38178
Translation factors [BR:
tms03012
]
Eukaryotic type
Initiation factors
eIF-4
TREMEDRAFT_38178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
18492936
NCBI-ProteinID:
XP_007003302
JGI:
Treme1_38178
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MNICTEKPANLPKLGEIGLEADASSGFGRKRSTAGSARPVGLGMTRPLPSQGMGTFNMGN
MGSFASGPLRAADRNRPSRVPSQGPLTPMISRGVARGSQRGTRRQPPPPADDASPLVVSA
NSWSAQRPSNDEGSPAYVERKVKALLNKLTAEKFDSIAQQILEWANKSEHETDGTSLKLV
IKLVFEKATDEAHWSQMYARLCRLILERLNPNVSETVEDGKVISGGVLFRRYLIGRCQVD
FENGWKAREDTATAAAARSEEDKQQLANREGDEAPMLSDEYYAAQKAKRRGLGLVQLIGE
LYKLEMISRNVIRQCLRRLLGNLDSPDEEDIESTCKLLTTIGGQYDEVEKDNMDVIFDRL
SVILKGDKLPSRIRFMIMDVFDLRRSGWQSRKPQSSVMTIAEVHEQAAREQAEKSAALSR
DAISRGGSRAGGRRDGPQTGEWQNVPTGRPPQRPTDFSNLGKLSSQTMPNAPSFTGPSGI
FARKGKTSLVTPPMSRQASTADLSNKFNVLSGEAADKAEPKQEEPQRKKITLKPRTKPMP
NEEAEAGEVKDEAKEMETTSDEESGMSEQQALDKIELDMKELWGDKGLIGTRNPSDIVEY
FRALPTQHHLLLATRLLDHLFRTQKTKDGEIIASGWKKSIEERVISPELLLKSVESRIST
LDDDAVDFPAAYKAVALLVRSIAASPDDLERLVSLIIVEGTPRLTPRMKWEKALREVDEA
SA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctgcacggagaaacctgcgaatcttccgaaattgggcgagatcggtcttgaa
gccgacgcatcgagcggtttcggtcgcaagcgcagtacagctggctcggcacgacccgtg
ggactcggtatgacgcgtccgcttccctcgcagggaatgggaactttcaacatgggcaat
atgggcagtttcgcatccggcccgctgcgtgctgccgacaggaatcgtccgagtcgtgta
cctagtcaaggaccactcacgcctatgatatctcgtggtgtggctcgcggcagccagcgc
ggcacgaggagacagcctccaccacctgcagacgatgcgtcgcccctggtcgtttcagca
aattcgtggtcagctcagcgaccatccaacgacgaggggtcgcccgcttacgtggagcgg
aaggtcaaagcattgctgaacaagttgaccgccgagaagttcgactccatcgcacagcaa
atcttggaatgggcaaacaaatccgagcacgaaacggatggcacgtcgctcaagctggtc
atcaagctggtgtttgaaaaggctacagacgaagctcactggtcgcagatgtatgctcga
ctctgccgtctcatcctcgagcgtctcaaccccaatgtcagcgaaacagttgaggatggc
aaagtcatatctggaggtgttcttttccgtcggtatctgataggtcgttgtcaagtggat
ttcgagaatgggtggaaagcgcgtgaggacactgcgacggctgctgcggctcggagtgaa
gaagacaagcagcagctggccaacagggaaggggacgaggctccgatgctcagcgacgag
tactacgccgctcaaaaagccaaacgacgtggtctcggtcttgttcagctcatcggggag
ctgtacaagctcgagatgatctctcgaaacgtgatcaggcaatgtctgcgacgactcctc
ggaaaccttgacagtcccgatgaagaggacattgagtccacttgtaaacttctcactaca
attggaggccagtacgatgaagtggaaaaagacaatatggacgtgatatttgaccgactc
agcgtcatcctgaaaggtgacaagcttccttccagaatacgtttcatgataatggatgtc
tttgatctgaggcgaagcgggtggcagtctcggaaacctcaatctagcgtcatgacgatt
gccgaagtgcacgagcaagcggcgcgagaacaagcggagaagtcggctgcgttaagtcga
gatgctatctcaagaggtggatcccgagcgggaggtcgaagagatgggccgcaaacgggt
gaatggcagaatgtccccaccggccgaccgccgcagcggcctaccgatttttccaaccta
ggcaagctcagttctcagaccatgccgaacgctccttctttcaccggaccttcggggatc
tttgcacgcaagggaaaaacgtcgctagtcacgcctcccatgtcgagacaagcctccacc
gcggacctcagcaacaagtttaatgtactcagcggagaagcagcggacaaagcggagccg
aagcaagaagagcctcagcgaaagaagataaccttgaagccgcgaacaaagcctatgcca
aatgaggaggcggaggctggtgaagtgaaagacgaagcgaaggaaatggagacaacatca
gatgaggagagcggcatgagtgaacaacaagctttggacaagatagaacttgacatgaag
gaactgtggggtgacaagggattgataggaactcggaatccctccgatatcgtggaatat
ttccgtgctctaccgacacaacatcacttgctgttagcaacacgattgctagaccacttg
ttccggactcaaaagaccaaagacggagagattatagcctcagggtggaaaaagtctata
gaggaaagagtaatttcgcctgagttgttactaaaaagtgttgaaagtagaataagcact
ctcgatgacgatgcggtcgacttcccagcggcctacaaggctgtggcgttgctagtgcgg
agtatagctgcctccccggacgacctcgaaagactcgtctcgttgatcatagtggaaggc
acacctcggctgacaccacggatgaagtgggaaaaagccctgcgggaggttgatgaagcg
tcggcttag
DBGET
integrated database retrieval system
