Tremella mesenterica: TREMEDRAFT_38408
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Entry
TREMEDRAFT_38408 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
tms
Tremella mesenterica
Pathway
tms04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TREMEDRAFT_38408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tms04121
]
TREMEDRAFT_38408
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_38408
Enzymes [BR:
tms01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
TREMEDRAFT_38408
Ubiquitin system [BR:
tms04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
TREMEDRAFT_38408
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TREMEDRAFT_38408
Exosomal proteins of other body fluids (saliva and urine)
TREMEDRAFT_38408
Exosomal proteins of colorectal cancer cells
TREMEDRAFT_38408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
Motif
Other DBs
NCBI-GeneID:
18492954
NCBI-ProteinID:
XP_007003320
JGI:
Treme1_38408
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MAAPMQVDEVVPGNTSEQGLYSRQLYVLGHEAMQKMAHSNVLIVGMKGLGVEIAKNVALA
GVKSVTIYDPNPVEIADLGTQFFLREEDVGKSRAEVTAPRLAELNSYVPIKVLPGSGEIN
PEMVAPFQVVVLTNTLIPKQVEIDEFCRSHGIYFIAADVRGLFGSVFNDFGNDFTCADPT
GENPQTGMVAEIEESEEAVVTCLEETRHGLEDGDFVTFSEVKGMEALNGCEPRKVTVKGP
YTFTIGNTVGSGSYKSGGIFTQVKMPKILHFKSLKESLAKPELFITDFAKWDRPTTLHAG
FQALSVFYERAGHLPRPRNAGEAVTIVSLAKEIHSAANGEGEVDEKILEALSFQATGELS
PMVAVIGGFVAQEVLKACSAKFHPMQQTMYFDSLESMPATQPTEADCQPLGSRYDGQIAV
FGKTFQNVIANQRQFLVGAGAIGCEMLKNWSMMGLATGEKGVIHVTDLDTIEKSNLNRQF
LFRAKDLGKFKADSAASAVVVMNPELNGHIKSYQDRVGPETENVYGDDFFASIDGVTNAL
DNVMARQYVDRRCVFYQKPLLESGTLGTKANTQVVVPFLTESYSSSQDPPEKSIPTCTVK
NFPNAIEHTIQWAREAFDALFVNPPTTVNLYLSQPNYVETTLKSSGQHYDQLKMIERFLL
KERPRSFEECIVWARLQYETDYANEIKQLLYNLPKDQVNSNGLPFWSGPKRAPDPLEFNI
DSPLDMGYIVSAANLHAFNYGLKGEKDPALFRKVLESMKLPEFVPKSGVKIQINENDPVA
NNDADEDVDTIVASLPSPSSLAGFRLAPVDFEKDDDSNYHIDFITAASNLRATNYGITPA
DRHKTKLIAGKIIPAIATTTSLAVGLVCLELYKLLDKKNKLEDYKNGFVNLALPFFGFSE
PIAAAKQKYGETDWTLWDRFDITGNPTLQEFLDWFKENHHLEVQMVSQGVSMLWSSFVPP
KKAAERMNMRMSELVEHVSKKPIPPWTKNLLVEVMVNDENDEDVEVPYCLVHI
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccctatgcaggtggacgaggtagtccctggtaacaccagtgagcagggtctt
tactctcgtcagctatatgtcttgggtcatgaagccatgcaaaagatggcacattccaac
gtcctcattgtaggtatgaaaggactaggcgtggaaattgcgaagaacgttgctttagct
ggagtcaagagcgtcaccatatacgaccctaaccctgttgaaatcgccgatcttggtaca
cagttttttctccgagaagaagatgttggaaagtcccgagcggaagtcacagcaccaaga
ttggcggaattgaacagctatgtgcccatcaaggttctgccaggaagcggggagatcaac
cccgagatggtagcccctttccaggttgtcgtcttgacaaatacactcatcccgaagcaa
gttgagattgacgaattttgcagaagccacggaatatatttcatcgctgctgatgtacga
ggtctcttcggatcggtattcaacgactttggcaatgacttcacttgtgcagatcccaca
ggcgagaatccccagacaggcatggtggccgagattgaggagagtgaagaagcggtagtg
acctgtttggaagaaacccgacatggattggaggatggagactttgtgaccttttcagag
gtcaaaggaatggaggctctcaatggttgtgaaccacggaaagtcactgtgaagggtcca
tataccttcaccattggcaataccgtcgggtcggggtcgtacaaatctggtggtatcttc
acacaagtcaagatgcccaaaatccttcatttcaaatcactcaaagaatcccttgccaaa
ccggaactcttcatcactgactttgccaaatgggatcgtcctaccacccttcatgccggt
ttccaagccctctccgtcttttatgaaagagccggccatctacctagaccacgcaatgca
ggtgaagcagtcacgatcgtgtccctcgcgaaggaaattcattccgctgccaacggtgag
ggtgaagtcgacgaaaaaatcttagaagccctctcgttccaagccacgggcgagctgtct
cccatggtagctgttatcggcggtttcgtggctcaagaagttctcaaagcttgctcagca
aaattccatcctatgcaacaaaccatgtactttgactcactcgaatccatgcccgccacc
caacccactgaggcggactgccaacctcttggatcgagatatgacggtcaaatagctgtt
ttcgggaaaaccttccagaatgtcatcgcaaaccaaagacagtttttagtcggtgctgga
gctatcggttgtgagatgctcaagaactggagcatgatgggtttggcgactggtgaaaag
ggtgtgatacatgtcactgatctggatacgattgagaagagcaatttgaatcgacagttt
ttattccgtgctaaggatctgggcaagtttaaagcggacagtgcggcatctgcggtggtt
gttatgaaccctgagttgaatggacatatcaagagttatcaggatcgtgtgggaccagag
actgagaatgtctatggtgacgacttttttgcctcaatcgacggtgttaccaacgctctc
gataacgtcatggcacgacaatacgtggacagacgctgtgtcttctaccaaaagcccctt
cttgaatccggcaccctaggaacgaaagcaaacacccaagttgtcgttcccttcctcact
gagtcctactcatcttctcaggatcctcccgaaaagtctatccccacctgcacagtcaaa
aacttcccgaacgccatcgaacatactattcagtgggcacgggaagctttcgatgccctg
tttgtcaatcctcctaccacggtcaatctttatctcagccagccaaattatgttgaaacg
actctgaagagctcgggtcagcattacgaccaattgaagatgattgaacggtttttattg
aaggaaagaccgagaagctttgaggaatgtatcgtgtgggcgaggttgcagtatgagacc
gattatgcgaatgagatcaagcagttgctttacaacctgcccaaggatcaggtcaattcc
aacggcttacccttctggtccggtcctaaacgtgctcctgatcctctcgagtttaacatt
gacagccccctggatatgggatacattgtttctgcggccaacctccatgcattcaattat
ggtctgaagggggagaaagacccagctttgttcagaaaggtattggagagtatgaaactt
ccagaatttgtaccgaagagtggggtcaagatacaaatcaacgagaatgatccagtggcc
aacaacgatgcggacgaagacgtagataccatcgttgcatctcttccatctccatcttcc
cttgcaggcttccgtttagctcccgtagactttgagaaagacgacgactcaaactaccat
atcgatttcatcaccgccgcgtcgaatcttcgtgccaccaactacggtatcactcctgca
gacagacacaagaccaagttgatagcggggaagattattcctgctattgccacgacgacc
agtttggcggtgggtctggtatgtctggaactgtacaagctgctggacaagaaaaataag
cttgaagactacaaaaacggctttgtcaacctcgcacttcccttctttggtttctccgaa
cccatagcagctgccaagcagaagtatggagagacggactggactctttgggaccgattt
gatatcactggtaatccgacattacaagagttcctcgattggttcaaggagaatcatcat
ctggaggtacagatggtgtcgcaaggagtgtcgatgctgtggtcatctttcgtccctcct
aaaaaagcggcggaacgtatgaacatgcgcatgtcagaattggtcgaacacgtgagcaag
aaacccattcctccatggaccaaaaacttgttggtggaagtcatggtgaatgatgagaat
gatgaagatgttgaagtgccttattgcttggtacatatctag
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