Tremella mesenterica: TREMEDRAFT_39163
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Entry
TREMEDRAFT_39163 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
tms
Tremella mesenterica
Pathway
tms00330
Arginine and proline metabolism
tms00480
Glutathione metabolism
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
tms04148
Efferocytosis
Module
tms_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
TREMEDRAFT_39163
09106 Metabolism of other amino acids
00480 Glutathione metabolism
TREMEDRAFT_39163
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
TREMEDRAFT_39163
Enzymes [BR:
tms01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
TREMEDRAFT_39163
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
18493022
NCBI-ProteinID:
XP_007004509
JGI:
Treme1_39163
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MSTTVIDRFVFPSQVVGWSSEETLIPTPLSTSKAPTSEDLLKVLDPNAQMPYSPQHYLPT
PPTTSPLLRNKEVTDLDPIADINIHEMIQSIIADKMEDEAAFFAADLSAVYQAVQMWRQS
PMGERVEIFYAVKCNPSPPVLHLLSLLGLSFDCASTSEVTQVLSLPVKPNPKRIIYANPC
KPASHIRAAQAQGVEMMTFDNADELYKIKRFYPQAKLVLRMLTDDSKSLCRLGLKYGAPL
STCPGLFAVAKQLGLNVIGVSFHVGSGCKDPMLFADAIWRARKVFDMGKSAGYDFTLLDV
GGGFERATFAEMSQVVRDSLDLYFPVELGIRVIAEPGRLLVSSAFTLATHIIARRRAIPS
GIAMPSSPKEDISEEDQGNEEGTDVMYYINDGVYGSFNCIMFDHQIVHPYPLSLGHSPTW
AVPSFPPPPNVHLPVDLSVKLGYVENEKASVWGPTCDSIDCVRETVKLPKGLEVGDWLGW
GEMGAYTLCAASTFNGFDRSPVHWTTGGTTTNALAVRAVLDSFCGPER
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaccgtcatcgatcgtttcgtctttccctctcaagtcgtaggatggtcatca
gaggaaactttgatccctactcctctctctacctctaaagctcccacgtcggaagatctt
ctcaaggttctagacccaaatgctcagatgccgtactctcctcagcattaccttcctacg
ccaccgaccacgtcccctcttttgaggaacaaagaagtcacggatctcgaccccattgcc
gatatcaacattcatgaaatgattcaatctatcattgccgacaagatggaagacgaagcc
gcgttcttcgccgctgatctttcggcggtttatcaagctgttcaaatgtggcgtcaatca
ccaatgggtgaacgtgttgaaattttctacgctgtgaaatgtaatccttcaccacccgta
ctccatttactctctcttcttggtctttctttcgattgcgcctcgacttcagaagtcact
caagttttatctttacctgtcaaaccgaacccaaaaaggatcatttatgccaatccgtgt
aaaccggcttctcatatccgagcggcacaagcgcaaggtgtagaaatgatgacgttcgac
aatgccgatgagttgtacaagattaaacgtttttatcctcaggcgaaactggtcttacga
atgcttaccgatgattcgaaatctctttgtcgtctcggtctcaaatatggtgcaccgctt
tccacttgtcctggactttttgcggtggctaaacaactcggcttgaacgtcattggggtc
agttttcacgtcggaagtgggtgtaaggatccgatgttgttcgcagacgctatttggcga
gcacgaaaggtctttgatatgggtaaatccgcaggatacgactttacgttactcgatgtg
ggtggtggattcgaaagggctacatttgcagagatgagtcaggtggtaagggatagtttg
gatttgtatttccctgtggaattaggtatcagggtaattgcggaacctggaagattactc
gtttcttccgctttcactttggctactcatatcatcgctcgtcgacgcgctatcccatct
ggaatcgcaatgccttcttcacccaaggaagatatctcggaggaagatcaagggaatgaa
gaagggacggatgtaatgtattacattaacgatggagtatacggatctttcaattgtatc
atgttcgaccatcaaatcgttcatccttaccctctctctttgggtcattccccgacttgg
gcagtaccatctttcccaccaccacccaacgtgcacctgcctgtggatttgagtgtcaag
ctgggatacgtggagaatgaaaaggcttcggtttggggtccgacttgtgactctattgat
tgtgtgagagagactgtaaagttgccaaaaggtttggaagtgggtgattggttaggatgg
ggtgagatgggggcgtatactttatgtgcggcgagtactttcaacggattcgaccgctcc
cccgtacactggacgacgggcggtacgactaccaacgctctggctgttcgagctgtgctc
gactctttctgcggtccagaaagatga
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