Tremella mesenterica: TREMEDRAFT_39460 Help Entry TREMEDRAFT_39460  CDS       T03139                                  Name (RefSeq) hypothetical protein   KO K10601   E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27] Organism tms  Tremella mesenterica Pathway tms04120   Ubiquitin mediated proteolysis tms04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:tms00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     TREMEDRAFT_39460    04120 Ubiquitin mediated proteolysis     TREMEDRAFT_39460  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:tms04121]     TREMEDRAFT_39460 Enzymes [BR:tms01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      TREMEDRAFT_39460 Ubiquitin system [BR:tms04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     TREMEDRAFT_39460 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-rbx1 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-ANAPC11 zf-RING_16 zf-RING_5 zf-C3HC4_4 zf-RING_11 zf-C3HC4_3 Prok-RING_4 zf-RING-like zf-RING_Vps41 zf_RING_Vps8 FANCL_C Motif Other DBs NCBI-GeneID:  18493051 NCBI-ProteinID:  XP_007004986 JGI:  Treme1_39460 LinkDB All DBs Position Unknown AA seq 742 aa AA seqDB search MSRRLAAYGLASTALAGVVVTSAIKSRPNFFSAAVAVGRSSGALMILGNFALFNVICLGI ALKTIFFGRLRPIEYEHLFERLWLFLTESLLALTIFRDDFNAPFAIMYSLLLFLKCFHWI TADRVDYMDQIPPPGPPITYHLRISSIISLLTAVDMILVIYSLETIILDGPSAMILFASE FMILLASISGTFARYMIGLIDLRRARGRADAPSWEEKSMYLFYIDLAVDFTKLLTYLSFF AVILMHYGLPLHILRDVYMTLRSFLSRCGDLIRYRRATRDMDALYPNATAEELERSGDRT CIICREEMIAAQEDRAGNGGPNETPKKLACGHVFHFHCLRSWLERQQSCPTCRRDVLRTA PTRPSARPGRPAPPAPGAIPQVNAGPNNNQPLRAAYEDFFRFAQNPDQPTPAGVPPPRQG AAIAADLEAAADAQFQRAVQHTTPVVTTNAAEANDSVDGQIQRSIWGSRVVPGQFFPPLL GATPRSSQSTPVRLSTGLAPTPRPSLGGMSSNRVRLQPPERVANEPLVNPSQTSQDQTPN VSGPSGATTPFHSNPPVIFTSTGAVRPPLGPAPAAPNGIENDARRVAAEAAMRRSGLVPP GEMRTRPSSPLEPTTISPHISATNPDSTIPPFAVNTASDNPSSDTASPKGKQRAIPDDWD AQPLHIPLLSPLSSQPLIRPTTSWGRHPVNVREALDDRLRLLRDVDEVVWGLIGELSRAK SAWEGEDQGVSSDNNGSGTGEG NT seq 2229 nt NT seq  +upstreamnt  +downstreamnt atgtcccgacgtttggcggcatatggtctagcttccactgctctggcaggggtggtggtc acttctgccataaagagcagacctaacttcttttctgctgctgtcgcggttggtcgaagt agtggggcgttgatgatcctgggtaacttcgcactctttaacgtcatttgccttggtatt gcactcaaaaccatcttcttcggccgacttcgacctatcgaatatgaacacctctttgaa agattatggttgttcttgactgagtctctattagcattgacaatattccgagacgacttc aacgctcctttcgctatcatgtacagtttactcttatttctcaaatgtttccattggatt actgccgatcgtgtcgactacatggatcaaatccctcctcccggccctccaattacatat catctcagaatatcatccatcatctctctcctcactgcagtcgatatgattctcgtcatt tattctctcgagacgatcatcctcgatggaccatcagccatgatccttttcgcttcggaa ttcatgattctactcgcttctatctctggcacctttgccaggtacatgatcggtctgata gatttaaggagagccaggggaagggcggatgccccaagctgggaggaaaagtcgatgtat ctgttttatatcgatcttgctgttgactttacaaaactcctcacttacctctcattcttc gctgtcatcctaatgcactacggcctccctctgcacattctccgagacgtctacatgacc ctccgttcctttctctctcgctgcggagatcttatccgctatcgtcgagctacgagagac atggacgctttgtatcctaacgccacggcggaggaactggaacggtcgggtgataggact tgtatcatatgcagggaagaaatgattgctgctcaagaggacagagcaggtaatggggga cctaatgagacgccgaagaagctggcttgtggacatgtctttcactttcattgtttgcga agctggttggagagacagcagagttgtcctacttgtcggcgagacgtcttgaggacagcc cctacccgacctagcgccagaccaggtagaccagccccaccggcacctggcgctatcccg caggtcaacgcagggccgaataacaatcaacccctcagagcggcatacgaagattttttt cgatttgcccagaatccagaccaaccgacacctgcaggtgtaccacccccacgtcaaggt gccgcgatagccgcggatctagaagcagccgccgacgctcagtttcagagagctgttcaa catacgacacccgtcgtgactacgaatgccgccgaagcaaacgatagcgtcgatggccag attcagcgatcaatctggggctctagagttgtaccgggtcaattctttcccccgttactc ggtgcgactcctaggtcttctcaatccaccccggtcagactatcaacaggactcgcaccg actccccggccatcgcttggtggtatgagctcgaacagagtccgattgcaacctcctgaa cgagtcgcaaatgaacctctcgttaatccctctcaaaccagtcaagatcaaacaccgaat gtatccggtccttcgggtgctaccacaccttttcattccaatcctcctgtcatcttcact tccactggtgctgtccggccacctttaggtcccgctccagcggctccgaatggtatcgag aacgacgctcgtagggtcgctgcagaggcggcgatgagaagatcaggcttggtccctcct ggagaaatgagaacaagaccgtcttcacctcttgaacctaccaccatttcaccccatatt tctgccaccaatcctgattctactatcccaccttttgctgtcaacacggcctctgacaat ccgtcatcggatactgcttcacccaaaggaaaacaacgagctatacccgatgactgggat gctcaacccttacatatccccctcctatctcctctatcttctcaacccctcatccgacca acaacctcgtggggtcgacatcctgtgaacgtacgggaggctttggacgatagattgagg ttgttacgcgatgtggacgaggtggtatggggtttgataggagagttgagtagggctaaa agtgcttgggagggggaagatcaaggagtttcatctgacaataatggtagtgggacaggg gaggggtga

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