KEGG   Tremella mesenterica: TREMEDRAFT_39829
Entry
TREMEDRAFT_39829  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K05236  coatomer subunit alpha
Organism
tms  Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:tms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tms04131]
    TREMEDRAFT_39829
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tms04147]
    TREMEDRAFT_39829
Membrane trafficking [BR:tms04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    TREMEDRAFT_39829
Exosome [BR:tms04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   TREMEDRAFT_39829
  Exosomal proteins of bladder cancer cells
   TREMEDRAFT_39829
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 TPR_COPA_B Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_Gbeta EIF3I Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_Aladin Beta-prop_WDR41 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st DUF5074 Aa-Ago_N
Other DBs
NCBI-GeneID: 18493083
NCBI-ProteinID: XP_007005682
JGI: Treme1_39829
LinkDB
Position
Unknown
AA seq 1223 aa
MQMLTKFESKSPRVKGIAFHPKTPLLAASLHNGTIQLWNYQMGTLVDRYDEHDGPVRGIC
FHPTQPIFCSGGDDYKIKVWNYKQRKCLFTLTGHLDYVRTVFFHREYPWIISASDDQTIR
IWNWQSRTCIAILTGHNHYIMCAQFHPWDDLVVSASMDLTVRVWDISGLRKKNQAHQAPM
SLDEQVSRANQGQADLFGNTDAVVKYVLEGHDRGVNWASFHPTLPLIVSCGDDRQIKLWR
MSETKAWEVDSCRGHFNNVSMTMFHPRHELILSASEDKTIRVWDMTKRTAVQTFRREQDR
FWVLCAHPELNLFAAGHDNGLIVFKLERERPAFSLSGNQLFYVKDKIIRMADLSTGTNQG
ICSVRKLGSQWAQPRTLSYNPAERSVLITAAAENGTYELVTLPKTSAPSPNDGKDTPSDG
KKGTGACAIFVGRNRFAVLDKTGQNIEFRDLSASLTKTVKCPVTTNEIFYGGTGCLLLSS
TSSVVLFDMQQSKVLAEISAPPVKYVVWSADGNTVALLSKHTITIANKALVQSALIHETI
RIKSAAWDDSGILIYTTLNHIKYALPQGDNGIIKTLEQPVYLTRVKGQVVHCLDRTAKPR
TITIDPTEYRFKLALIRKHYDEVLQIIRSSNLVGQSIIGYLQKKGYPEIALHFVQDPQTR
FDLAVECGNLNVALEMARTVDREDVWERLGAAALKQGNHSIVETAYQKTKNFDKLSFLYL
VTGNLQKLGMMQVIAAKRGDNMSRFQNSLYLGDVKSRVAILRETGQYPLAYYTAKTNGLD
DTALDILEEAGMTEDDLPPPPQKSGHMSLAPPPVVFPQTDSNWPIKSLGESFFDRALANG
GVDGLIGESAGMANGGEQLDAWAADEPIDVEVGEDEAEDEGWDLDAEVPIEPEPEVEVEA
EIVEADLSEGVTAGVNEDEMWIKNSPLAADHAAAGAFESAMQLLNRQVAAVNFAPLKPLF
LAAYEAAHVHVPANPSLPPLVLQVRRNPETTELREVLPVISFTLPDLQAGEVAEAKRHFS
RGKFAESLTAFRSVLQKLLLVVATSAAEAEEIKELVISCKEYIIGLTMETERRRLVTEDA
DNVVRNLELAAYFTHCKLMPAHEQLALRSAMGVFSKAGNVSTAAVFARRLVDSSPSDAKV
ITQARSILTAGQRNPRDTHEIAYDHFTPFDICPASLTPIYAGSPSVQSAYTGARYLPEYK
GSICVVDGVTQVGTPGSGLRSMV
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgcagatgctcacaaagttcgagagcaaaagtcctagagtcaagggtatcgcttttcat
cctaaaacacctctcttagcagcgtcacttcataatggtacgattcaattgtggaactac
caaatgggtacacttgtagacagatacgacgaacatgatggacctgttagagggatatgt
tttcatcccactcaacctatcttttgctcaggaggagacgattataagattaaagtatgg
aattacaaacagagaaaatgcttgttcaccctaaccggacatcttgattacgtgcgcact
gtcttctttcatcgagaatatccatggatcatctcggcttcggacgatcagaccattcgt
atttggaactggcaatcacgtacctgcattgctatcctcactgggcacaaccactatatc
atgtgtgcccaatttcacccctgggatgatctcgtagtctctgcctctatggatcttact
gtccgcgtatgggacatctcaggccttcgtaagaagaatcaagctcatcaggcaccgatg
tcgctggacgaacaggtctcgagagccaaccagggtcaagcagacttgttcggcaatacc
gacgctgtggtcaagtacgtcctggagggacatgatcgcggtgtcaactgggcttccttc
catcccactcttcccctcattgtctcatgtggtgacgaccgacaaatcaagctttggcgc
atgagcgagaccaaggcatgggaggtggattcttgcagaggacatttcaacaatgtgtca
atgaccatgtttcatcctcgacatgagctcattctgtctgccagcgaggacaaaacaatc
cgagtatgggacatgacaaaacgaacagcggtacaaacattcagaagagaacaagatagg
ttctgggttttgtgcgcccatcctgaactaaatcttttcgccgctggacacgataatggg
ttaatcgtcttcaagctggagcgtgaacgccctgcattctctctatctggcaaccaatta
ttctatgtgaaggacaagatcatccgcatggccgacctttcgaccggcaccaatcaagga
atctgttccgtgcgaaagcttggctctcaatgggcgcagccacggacgctcagctacaac
ccggcagaacgttctgtgcttataacggcggcagctgaaaatggcacctacgaacttgtc
accctcccaaagacatccgccccctctcctaacgatggcaaagacactccgtccgacggc
aagaagggcactggggcttgtgccatattcgtcggtcgtaatcgcttcgcggtcttggac
aagacaggtcaaaatatcgagttccgcgacctttcagcttcactcacaaagaccgtcaaa
tgtcccgtcaccaccaatgagatcttctatggcggtaccggttgtctcttgctcagctca
acatctagcgtcgtccttttcgacatgcagcaaagcaaagtgctggcggagattagtgct
ccccccgtcaagtacgtcgtttggagtgcagacggcaatacggtggctttgctaagcaag
cacaccatcaccatcgccaataaagccctggtacaaagtgctctcattcatgagacaata
cgtatcaagtctgctgcatgggacgactcgggcattctcatttacaccactctcaatcac
atcaagtacgctctcccacaaggtgataacggtatcattaaaaccctcgaacaaccggtc
tacctcactcgcgtcaaaggtcaggtcgtacattgtttggatcggacagcaaaaccacga
acgataacaatagaccctaccgagtaccgattcaaactcgcactcatacgaaagcactat
gacgaggttttgcagattatacgcagtagtaacttggttgggcagagtatcatcggttat
ctgcaaaagaagggttatccggaaatcgcattgcactttgtgcaagatccacagacgagg
tttgatttggctgtggaatgtgggaatttgaatgtggctctggagatggccaggacggta
gatagagaagatgtttgggagcgattgggagcggcggcattaaagcaaggcaaccattct
attgtcgagaccgcctatcaaaaaaccaaaaactttgacaaactgtctttcctctacctc
gtcactggtaatctgcaaaagctggggatgatgcaagtcatcgcggcgaaacggggcgat
aacatgtctcgcttccaaaattctctgtatctgggcgatgtgaagtcccgagttgctatc
cttagagaaacaggacaatacccgctcgcatactatacagccaaaactaatggacttgat
gacaccgccttagatatcctagaagaagcaggcatgactgaagacgatttacctcctcca
cctcaaaagtccggtcacatgtctcttgctcctcccccagtcgtcttccctcagacagat
tcgaattggcctatcaaaagcctgggcgagtcattcttcgatcgcgctctggccaatgga
ggtgttgatggtctcattggtgaatcggcaggtatggccaatggtggcgagcaactcgat
gcgtgggcggcggatgagcctatagatgttgaggtcggggaagacgaggcggaggatgaa
gggtgggatttggatgctgaggtgcctattgagccagagccagaagtggaagttgaggct
gagatcgtggaggccgacctgagtgagggtgtgacagcgggtgtgaatgaggatgagatg
tggatcaagaattcgcctctagccgcggatcatgcggctgctggcgcgttcgagtcggca
atgcagctgctcaaccgtcaagtcgctgccgtcaactttgctcccctaaaacccttgttc
ttagctgcctatgaagctgctcacgtccacgtccccgccaatccttctcttccccctctc
gtccttcaggtccgtcgaaatcccgagacaaccgaattacgcgaagtcctccctgtcatc
tcgttcactctccccgatctgcaagctggcgaagtggcagaagccaaacgtcatttctct
cgtggaaaattcgccgaatccctcactgccttccgttccgtcctccaaaaattactccta
gtggtggccacttctgctgctgaggctgaagagatcaaagaactcgtgatcagctgcaaa
gagtacatcatcggcttgacgatggagacggaacgaagacggctggtcactgaagatgct
gacaatgtcgtgcgaaatctagagctcgcggcttactttacgcattgcaaattgatgcct
gcccacgaacagctggcgttgcggagcgcgatgggagtgttcagcaaagcgggtaacgtg
agcacagcagcggtgtttgcgcggagattggtggattccagtccttcggatgccaaggtg
atcacacaggctcgttccattttgactgctggtcaacgcaacccccgagacacccacgaa
attgcatatgaccatttcacaccctttgacatctgtcctgcatccctcacccccatttac
gccggctcacccagcgttcaatccgcatacaccggtgcgagatatctgccagaatacaag
ggcagcatatgcgtggtggacggtgtgactcaagtgggaactccaggtagtggattgaga
tcgatggtgtaa

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