Tremella mesenterica: TREMEDRAFT_39966
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Entry
TREMEDRAFT_39966 CDS
T03139
Name
(RefSeq) hypothetical protein
Organism
tms
Tremella mesenterica
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
BET
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_NOL10_N
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
DSE1_N
ASA1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_VPS8
NBCH_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_IFT140_2nd
Hugin
CFAP251_N
Mis12
Motif
Other DBs
NCBI-GeneID:
18493097
NCBI-ProteinID:
XP_007006031
JGI:
Treme1_39966
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MGKHPTDRREKSSTQSRRPKPYGSRPHVDVLFEGVPPTKKNNPSSIPPISGKRNFNNASV
RPADVKGKAKASPPPSSDVPTDINDLLGREEERSGGTFIIVAGSYEKLLYGIEGSFRPGE
HKPTLKPIFIFPAHLGCVKAVAASPGGKWLATGSEDEFIKVWDLRRRKEVGSLSQHSGSI
TSLHFPTSSHLVSTSVDATLSLFRTSDWALLKSLKGHSGRVNDVDIHYTGRVALSVGKDQ
TLKMWDLMRGRGASSLALGQEAELVSWSPTGMFFAVLFTHKIEIYSLSIKLLHTLESKIR
FNTMTIASLPSTDPDGQPTLVLCVGTEKGVVEVHRLEEPIEEGDPWNVIKISTLGGHTNR
RIKSVSTLDFTRDGIASTLLSSVSSDGLINVYDLSPVMEKSEETSQPIATYDTKGSRLTC
VVMADGKKEFKASKGKVNKRPEDEVESDGDTSGSEEEGDDDIYDASGDEGEDGEGEDGVE
VELEEDEEEEEEEEEGEHPGPPPSSTIVEPPRSPRPDLSSQAPTEGASTPLDGLAPLEVS
TLEPSPVDGVPTPNLLPRDAPLPPTPHPNDETPPELTPGLIPPVVSTPTVFTIEETPSLV
APAADQEPAPMTPPPAALNVIPEAFPTPSGTTLKRAGDELDGREEKRVREEAAEQALPIS
EPSSQPAGEATSQPALPLIPSIHREYVPPPPRASGPTTPITLTQHKHLLAAVRALKKNPN
GVSFLEPVDPIKYGIPTYFQVIAKPMDLATVETKLIVSDPRGPPKDKSKMSKWDTSKGTY
GSVSEVVDDVRQIWENTRMFNGPTHVVSLAADKLEESLEKALRNLPAEPLPSALPSPATP
VAGPSVPLTSRGSMSQPPVIRRTSEGLESRPKREIHAPSKELTYAEGARKPKRRNDPQLQ
WVVKTLKTLESTNKHYNAVSPFLFPVDQIIADLPEYAKVIKKPIDLHIIKAKLDDGVYED
VSEVNADMKLMIRNATTYNPPNHAVHTAAQQLQRLWEEKWRGLPPKVDPAAAAPRDTPSD
LLDEDDGDDDDAALQQKQARLAELRKEMTVLEKEIADIQAKPRKKVKSKKPKARKQSVSK
VSPGVNGHAKKPRKSKEASFKEEEEEEEETALTMTQKQELADKMGAADEDTLGKAIAIIQ
ATTTIGDSGEIELDIDSLPPLTQVKLYNLVCRGGRKLTRKVQKSKPSLGSGRKATGGTAR
KSMNEQEEAERIRRMEEQLKGFDSVPQQGWDSESSEEESSEEE
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcatcctacagatcgtagagaaaaatcctccacacagagtagacgaccaaag
ccttatggaagtagacctcatgtcgacgtgctctttgaaggagttcctcctaccaaaaag
aacaacccttcctccattccccctatcagtggaaaacggaacttcaacaatgcctcggtg
agacctgcagatgtcaaagggaaagctaaggcttcaccacctccgtctagcgatgtaccg
acagatatcaatgaccttctgggtcgagaggaagagaggagcgggggaacgttcatcatt
gtcgctggatcatatgagaaattgctctatggtatagaaggctctttccgacccggggaa
cataaaccgactctgaaaccgatattcatcttcccagctcatctaggttgtgtcaaagct
gttgctgctagtcctggaggaaagtggttggcgacgggaagcgaggacgagtttatcaaa
gtatgggatttgaggagaaggaaagaagtcggtagtctatctcaacattctggatccata
acctctctccacttccccacatcctcccacctcgtctcaaccagcgttgacgccacctta
tccctcttccgcacttcagattgggctctgctcaagtctctgaagggccattcgggcaga
gttaacgatgtggacatccactatacgggtcgggtggcactcagtgtagggaaggaccag
actttgaaaatgtgggatctgatgagaggtcggggagcgtctagtctggctctaggtcaa
gaggcagaattggtcagctggagtcccaccggaatgttcttcgccgtactcttcacccac
aagatcgaaatctactccctgtcaatcaagctgcttcataccctggagtccaaaattcgt
ttcaacactatgacgatcgcgtcactaccatcaacagacccagatggacaacctactttg
gtcttatgcgtcggtaccgaaaagggcgtggttgaggtacatagattggaggagcctatt
gaggaaggtgatccttggaatgtgatcaaaatcagcacacttggtgggcataccaaccgc
aggatcaagtcagtgtcgacgcttgatttcacaagagatggtatagcgtcaacactcctc
tcgagtgtttcatctgacggcttgatcaatgtctatgatttatctccagtgatggagaag
tcggaagagacatcacagcccatcgcgacgtatgatacgaaaggaagtagattgacgtgc
gtggtgatggcagatggcaagaaggaattcaaagcatcgaaggggaaagtgaataaacga
cctgaggacgaagttgagtcggatggggacacgtcagggagcgaagaagaaggggacgat
gatatatacgacgcatcaggtgatgagggggaagatggcgagggagaggatggagtggag
gtggaacttgaggaagacgaggaagaggaagaggaagaagaggaaggagagcatcctggg
cctccaccctcatccacgatcgttgaaccccctcggagcccgcgtcctgatctctcaagt
caggctcccacagaaggagcatctactcctctggatggcttagctcctctcgaggtttcg
actttagaaccttcgccagtagacggagtaccgacgccaaacctcctaccaagagatgca
cctcttcctccgaccccgcatcctaatgatgaaacacctccagaattgacacctgggctg
attcctcctgttgtgtcaacacctacagttttcaccattgaggaaacaccctcactcgtg
gctccagcggcggatcaggagccggcgcccatgacacctccaccagcagcgctcaatgtg
atacctgaagcttttccaacaccttctggaacaactctgaagcgtgccggtgacgagctc
gatggccgtgaagagaagcgggtgagggaggaagccgctgagcaagcgttaccgatatca
gagccttcgtctcagcctgcgggagaagccacaagtcagcccgccctccccctcataccg
tcgatccatcgcgaatacgtacctccccctccacgagcatcaggacctacgacacctatc
acattgactcagcacaaacacttgcttgccgccgttcgagctctgaagaaaaaccccaat
ggcgtgtcgttcctcgaaccagtggatccgatcaaatacggcatccccacctacttccag
gtgatcgcgaagcccatggacctggctacagtggagacgaagttgattgttagcgaccct
cgcggtcctcccaaagataagtcgaagatgagtaaatgggacacaagcaaggggacttac
gggagcgtgagtgaagttgttgatgatgtcagacagatatgggagaacacgaggatgttc
aatgggcctacgcacgtggtgtcattagctgcggacaagttggaggagagtttagaaaag
gctctcaggaatctgccggcagagcctttgccttctgctttaccatcacctgcaactccc
gtcgctggcccgtctgtccctctgaccagtcgaggttccatgtctcaaccacccgtcatt
cgtcgtacgtccgaaggacttgagtcgcgaccaaaacgtgagattcacgcgccatccaag
gaactcacctacgccgaaggcgctcgtaagccaaaacgtcgcaatgatccccaacttcaa
tgggtcgttaagaccttgaaaactctggaaagtacaaacaaacattacaatgcagtatca
cctttcctcttcccggtggaccaaatcattgcggatttaccggaatacgccaaagtcatc
aagaagcccatcgatttgcatatcatcaaagccaaacttgacgatggtgtatacgaagat
gtctcagaggtaaatgcggatatgaagttgatgatccgcaatgctaccacatacaatcct
cctaatcatgcagtccacactgccgctcagcaactgcaacgattatgggaagagaaatgg
cgtgggttacctcccaaagtcgatcctgctgcggctgcgcctagggacacaccgagcgac
ttgttggacgaagatgatggggatgacgatgatgccgcgttgcaacagaaacaagcgagg
ttggccgaattaaggaaagagatgactgtgttggagaaagagattgcggatattcaagct
aaacctcgtaagaaggttaagagcaaaaaacctaaggcgaggaaacaaagcgtttcgaaa
gtttccccgggagtgaatggccatgcgaagaaaccgagaaagagcaaggaggcgagtttc
aaagaggaggaagaagaagaggaagagacggctctgacaatgactcagaaacaagagttg
gcagataagatgggtgcggcggatgaggatacgttggggaaagctatcgccatcatacaa
gctaccacgactataggagattccggagaaatcgaattagacatcgattcacttccccct
ctgacccaagtcaaactctacaacctggtctgtcgaggaggtcgcaaactcactcggaag
gtccaaaagtccaaaccgagtcttggaagtgggagaaaagccacgggaggtactgctcgt
aagagtatgaacgagcaagaagaggcggagaggattaggaggatggaagaacagttgaaa
gggtttgatagtgttcctcaacaaggatgggatagtgagagcagtgaagaggagtcgagc
gaggaggagtaa
DBGET
integrated database retrieval system