Tremella mesenterica: TREMEDRAFT_40147
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Entry
TREMEDRAFT_40147 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14818
ribosome assembly protein SQT1
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_40147
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
TREMEDRAFT_40147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
DUF6296
Motif
Other DBs
NCBI-GeneID:
18493118
NCBI-ProteinID:
XP_007006052
JGI:
Treme1_40147
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MMDEEEDNEGYDGEIIIGAPPEEMEEGMDVEREDNSWGVTSLHASGQSVFTISVHPLFPS
PPLAISGGEDDLGYIFCPLPPSSTTDINSETFPPIKLTGHTDSVVAVGWSHDGEMVATGG
MDGRVRVWRRVGKDGWKIWEFLTSLETGSEVVWLQWHPKGPVLAVGCEDAQVWMFNLPSG
QTMAVLSSHTLSSTAGLFPNPAKSLLTSSLDSSLILWDPRSPTPIWKTSIFVPPNSPELD
PAIHGITSLAVSPNGQIAAVGGAAGGVRLVNLAKGNVLNTLVGHAEGESVEALQFIDLFQ
GAGGGKGVVLISGGTDGKGFVWDVNTGRVRAEIQHEEPITSLAPHPPPKVHLITSASADS
TLKTWDVRTGVLVAEHKGHAGVVNGVCVAPAPVPAPSSDSPDESVDSQVVVSAGDDGVSL
IWRI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaagaagaggataatgagggttatgatggagagataatcattggtgctccg
ccagaggaaatggaagaaggaatggatgtggagagggaagataatagttggggtgttact
tcacttcacgcatcaggtcaatcagtctttaccatctctgtccatcctctattcccctct
cctccacttgcaatatcaggaggggaagatgacttgggttatatcttctgtccccttcct
ccatcctcgacgacggatatcaatagtgaaacattccctcctatcaaattgacgggtcat
acggattctgtggtagcagtgggatggagtcatgatggagaaatggtagctactggtggt
atggatggaagggtcagggtatggagaagggtcgggaaagatggttggaagatttgggaa
tttttaactagtttagagacggggagtgaagttgtgtggcttcagtggcatccaaaaggt
cctgtcttggctgttggctgtgaagatgcccaagtttggatgttcaatctaccctccggc
caaacaatggcagttctctcctctcacacattatccagcacagcaggtcttttcccaaac
ccggctaaatccctcctcacatcctccctcgactcttcactcatcctctgggaccctcgt
tcacctacaccaatatggaagacttccatatttgttcctcccaactcgcccgaactggat
ccagcaatacacggcattacgtctctcgctgttagtccgaacggtcaaatagctgctgtg
ggtggtgcagccggcggagtcagattagtcaacctcgccaaaggcaacgtgctgaacacc
cttgtgggacatgcggaaggagaaagcgtggaagcgttgcagtttatcgatcttttccag
ggtgccggtggagggaagggggtggttttgattagtggaggaactgatggaaaggggttc
gtttgggatgtaaatacgggaagagttcgagcggagatccaacatgaagaacctatcact
tccctcgctccccatcctccacccaaagtacacctcatcacctccgcttcggcagactcg
actctcaaaacatgggatgtccgaaccggtgtcctcgtggctgaacacaagggacatgcg
ggtgtggtgaatggtgtatgcgttgcccctgcccctgtccctgctccttcttcagattca
ccagacgagtcggttgatagtcaagtagtggtcagtgcgggggacgatggggtatcgttg
atctggcgaatatga
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