KEGG   Tremella mesenterica: TREMEDRAFT_40560
Entry
TREMEDRAFT_40560  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
tms  Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:tms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tms03009]
    TREMEDRAFT_40560
Ribosome biogenesis [BR:tms03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    TREMEDRAFT_40560
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th WDR54 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 18493164
NCBI-ProteinID: XP_007007016
JGI: Treme1_40560
LinkDB
Position
Unknown
AA seq 473 aa
MLPQEIILSACSTSTPGAGPSRPNTSLVPSIQAHDLLTCLPLHSYKSSTSALHSLSYVPS
RNGQGGTIMAVQENKSLLYVWAWQKDQMLSKLHLPDKLTCFSISPNGVWATGGSPGGQIY
LWELASGTLLSSFSAHYRQVVSLTFTPDSRLLLSASLDGSIHIHLVARLAEADHLGKPYG
TLRDHTLAIRDVVVGKTSGVHGGRCWTISDDGTVKMWDLHPPFDLLCTFSLTPASIPTAL
VVDSSERFFYVSTSNGDIFYVPLFRRRDEVGGLGAVEAVGGGVFGSSAVKLEGGRVISLK
TAITALALSITASHLLVGTVAGTVQIHSLPSHQHLSTISLPGPCSYISTLPRPPDMPVGP
STTTKDLWPVMEVKPLERVKNPPSWRTREASILLRADLDRLDSLRSVPVTKGNCAGLSVA
VESQGTRYSLTEEKLRVLQEENTALREGLERATRINETMWRSIVDGVVESESS
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgttacctcaagagatcatcctctcggcctgctccacttcaacgccgggagcaggacct
tctcgtcccaacacttccctcgttccttccatccaagctcatgatctccttacctgtctt
cctcttcactcgtacaagtcttccacctctgctttgcattcactttcctacgtccccagt
cgtaatggacaaggtggtaccatcatggctgttcaagagaacaagtcactcctctacgtc
tgggcatggcaaaaggatcagatgctttccaagttacatctccctgacaagttgacatgc
ttttcaatatctcccaacggtgtatgggcaaccggtggttctcctggaggtcagatctat
ctctgggaattggcctctggtacccttttgagctccttttccgcgcactaccgtcaagta
gtgtccctcacctttactccagactctcgactacttctctcagcctcactcgacggctct
atacacatccacctcgtcgctagattagcagaggccgatcacttgggaaaaccatatggc
actctgagagatcacacgctcgctatacgagatgtcgtagtagggaaaacttctggcgtt
catggaggccgatgttggacaatatcagatgatggaactgtcaagatgtgggacctacat
ccgccctttgatctgctctgcactttctctctcacccctgcatctatccccaccgcgttg
gtcgtggattctagtgaacgattcttctatgtatcaacgtctaatggagacattttctac
gtcccattgttcagacgccgagacgaggtgggaggattgggcgctgtcgaagctgtggga
ggaggagttttcggaagcagcgcggtcaagttagaaggtggccgtgtcatatctctcaaa
acggccataacagctctggccctttccatcaccgcttcacacctattggtaggtacagta
gctggcaccgttcaaatacactccctcccctctcatcaacacctcagtacgatctcccta
cccggcccatgttcatacatttccactctaccccgtccgccagacatgcctgtcggcccg
tcgacgacgaccaaagatctctggccggttatggaagtaaaacctttggaacgggtgaaa
aaccctccttcttggcggaccagggaagcctcgatcttacttcgggcagatctagatcga
cttgacagcttgaggtcagtaccggtcaccaaagggaattgcgctggtctttctgtggca
gtggagagtcagggaaccagatattctctcacagaggaaaagctgcgtgtgctgcaggag
gagaacactgccctgagagagggactggagagggcaacaaggattaacgagacgatgtgg
aggagcatcgtcgatggagtggtggaaagtgaatcatcttga

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