Tremella mesenterica: TREMEDRAFT_40757
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Entry
TREMEDRAFT_40757 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K13095
splicing factor 1
Organism
tms
Tremella mesenterica
Pathway
tms03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TREMEDRAFT_40757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_40757
Spliceosome [BR:
tms03041
]
Complex A
Other components
Complex A specific factors
TREMEDRAFT_40757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_3
zf-CCHC_2
DnaJ_CXXCXGXG
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
18493184
NCBI-ProteinID:
XP_007007285
JGI:
Treme1_40757
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MWRPAARVTGTNEVPLPAKRRFGLPEEAPPPGAPPTNFSRPPEEIKYFNGRLERDRDDRP
PPPREDYKPAPPYGDFKPPPPRDDYRRDDRDRRPDERDVRRDDFRRDDRDRYRDEPKRDD
RYDGRRDEKRKWDDDSAQRGRDAAPVEEGPRKRKSRWGDESQKTDVPGLPVALMGNVSQK
ELDNYAIHVRLDEINRKLRTGDVIPPDGQRSPSPPPAYDAYGRRTNTRDLRYRKRLEDER
VKLIDRAMKADPGFRPPIDFGGNRNRFGRPQEKVYIPVKEFPEINFFGLLVGPRGNSLKR
MERESGAKISIRGKGSVKDGKQRPDAWADDEEDELHCLITGDTEHAVKNCVALINKVIET
AASTPEGQNDHKRHQLRELASLNGTLRDDENQLCQNCGEKGHRRWECPAARVYSANVICR
LCGGAGHMARDCRGRGDPNLAKNTQSQFDSEYSALMAELGEGGQPGARPAGSIQQPDQQR
IPPWRIPENWLPTARPPYNGPPGQPGYGGGGYGQPQGGYGYGGPGGPGGPGGPGGYGGPP
GAGGADPYASYYQNLGQPQAA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgcccagccgcacgagtgacgggcacgaacgaagttcctctacccgctaaaaga
cgttttggtcttcctgaagaagctccccctcctggtgctcctcccactaacttctctcgt
ccacctgaggagatcaaatactttaacggtcgtctggaacgtgaccgagacgaccgccca
ccacccccgagagaagattacaaacccgcaccgccttatggcgatttcaaacctccccct
ccacgtgacgattaccgtcgagacgatcgagacagacgtcctgatgaacgcgatgtcagg
agggacgatttcagacgcgatgatcgtgatcgataccgagatgaacccaagagggacgat
aggtatgatggaaggagagacgaaaaacgcaaatgggatgatgacagtgctcaacgtgga
agagatgcagcaccagtagaagaaggaccccggaaacgtaaatcccgttggggtgatgaa
agtcaaaaaacagatgtacctggtctacccgtagctctcatggggaatgtctctcagaaa
gaacttgacaattacgctattcacgtccgactggatgaaatcaatcgcaaactccgaact
ggcgatgtgattcctcccgacggtcaaaggtccccctcccctcccccggcttacgacgca
tatggtcgtcgtaccaacactcgtgatctccgttaccggaaacgtctggaagatgaacgg
gtcaagctcatcgaccgcgctatgaaagccgaccccggtttccgtccacctatcgacttt
ggcggtaaccgtaatcgcttcggtcgtccccaggaaaaagtttacattccagtcaaagaa
ttccccgagatcaatttctttggtcttcttgttggtcctcgtggtaattcgctcaaacgt
atggaacgcgagtccggagccaagatttccattcgaggaaaaggaagtgtgaaagacggg
aaacaaagacctgatgcctgggccgatgatgaggaagacgaactgcattgtttgattacg
ggcgacactgaacatgcggtcaagaattgtgtcgcactcatcaacaaggtcattgagacc
gccgcctcgacgcctgagggtcaaaacgatcacaagagacatcaactgcgagagttggca
tcattgaacggtactttgcgtgatgacgagaatcagctttgtcaaaattgtggtgagaaa
ggccacagaaggtgggaatgtccggcggcaagagtatactctgccaatgtcatctgtcgt
ctatgtggtggagctggtcatatggcccgagactgtcgtggtcgtggtgatcctaatttg
gccaagaacactcagtcacagttcgattccgagtattccgcacttatggctgaattgggt
gaaggaggacagccgggcgctcgcccagcgggttcgatccaacagcccgaccagcaacgt
atccctccttggcgtatcccggagaattggcttcctactgctcgtcctccttacaacggc
ccccctggtcagccaggctatggcggtggcgggtacggccaaccgcaaggtgggtatggt
tacggcggtccaggtggacctggagggcctggtggtccgggaggttatggaggtcctcct
ggtgctggcggtgctgacccttacgcttcatactatcaaaacctcggtcagccacaggca
gcctaa
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integrated database retrieval system