KEGG   Tremella mesenterica: TREMEDRAFT_41430
Entry
TREMEDRAFT_41430  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
tms  Tremella mesenterica
Pathway
tms03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TREMEDRAFT_41430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tms03041]
    TREMEDRAFT_41430
   03036 Chromosome and associated proteins [BR:tms03036]
    TREMEDRAFT_41430
Spliceosome [BR:tms03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    TREMEDRAFT_41430
 Complex B
    TREMEDRAFT_41430
 Complex C
   U2 SnRNP specific factors
    TREMEDRAFT_41430
Chromosome and associated proteins [BR:tms03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    TREMEDRAFT_41430
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ SF3b1 HEAT_EF3_N HEAT_2 HEAT_ECM29 HEAT Htt_N-HEAT_1 Adaptin_N XMAP215_CLASP_TOG RRP12_HEAT
Other DBs
NCBI-GeneID: 18493239
NCBI-ProteinID: XP_007000910
JGI: Treme1_41430
LinkDB
Position
Unknown
AA seq 1135 aa
MAEQSYPTLQNFSAPQELLDEHAEMIEAEEIPDETMDRSQARQVAARQTEYHLRRFKRTE
ATLEGEDDSYEDRMRRQNLEKEEERVRKYKEQLEKDEQSKLDKPVDDKTPPRALTGGDTP
PKDQAGDATPPRRKRRWDVDDVKEEKPDVSSDTASTKRRSRWDQTPAAAPEAVIKRSRWD
QTPSSSDAAVGAASQTTNGVVMVEDKRYRAITDEELDSILPGVVDGYVIIEVPDDYKPAP
SVRKLVPAQTSDGFMMQDDADAVRARTAAGGLQGTTEQTEIEGIGTLQFLKPEDTQYFAK
ILGDGGGEEDDIGYTTEELKERKIMRLLLKIKNGTPPVRKSALRQITDRAREFGAGPLFD
KILPLLMERSLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG
REIISNLAKAAGLAHMISTMRPDIDHVDEYVRNTTARAFAVVASALGIPALLPFLKAVCR
SKKSWQARHTGIRIIQQIAQMTGCAVLPHLRNLVDAVADGLQDEQQKVRTMTALSLAALA
ESAAPYGIESFDNVLKPLWLGIRQHRGKTLAAFLKAIGYIIPLMDPEYAGYYVRECMPIL
IREFRTSDEEMRRIVLQVVKQCAGTEGVTPTYIKTEVLPEFYKAFWVRRMALDRRNYKQL
VDTTVELAQKAGVAEIVGRICNDLKDESEPFRKMVMETITKVIANTGAADIDERLEVQLI
DGIIFAFQEQTLEDTIILDGFSTVVSALGGRVKPYLPQIISMILWRLTNKSAKVRMLAAD
LTTKLAPIVKSNGEDHLLSKLGVVIFEQLGEEYPDALGSLIAAEGAIANVVGMTQMNPPV
KDLLPRMTPILRNRHEKVQEATINLIGRIADRGAEFVPAKEWMRICFELLDLLKAHKKAI
RRAAVNSFGYIAKAIGPQDVLSVLLTNLKVQERQSRVCSTVAIAIVAETCGPFTCIPAIL
NEYRTPELNVRNGCLKALAFVFEYVGEMSKDYIHSVVGLLEDALTDRDHVHRQTACAIVK
HLTIGVAGLGYEEALTHLLNLVWPNIFETSPHVIGGVMDAIEAMRLGVGPGVVLSYVLQG
MFHPARRVREVYWRMYNTLILGSSDSLVPFYPNLGSASDLASGQDYTRHHLMMSI
NT seq 3408 nt   +upstreamnt  +downstreamnt
atggccgaacaatcctatcccaccctgcagaacttttctgctcctcaagagctcctggac
gagcatgccgagatgatagaggcagaggagataccggacgagaccatggatcgatcacag
gctcgtcaggtggcagccaggcagaccgagtatcatctgcggcggttcaagcggacagag
gctacgctggaaggagaagatgacagttacgaggataggatgaggagacagaacttggag
aaagaggaggagcgcgttagaaagtacaaggagcagctcgagaaggatgagcagtcgaaa
ctggacaagccagtggacgataagacgccaccccgagccttgacaggaggtgacacccct
ccaaaagaccaagctggcgacgctacaccgccgagaaggaagagaagatgggacgtggat
gatgtcaaagaggagaaacccgatgtttcctcagatacggcgtcgaccaagcggaggtct
cgttgggatcagactccggcagctgctccagaagcggtaatcaagcggtcgcgatgggat
cagactccttcatcttccgatgccgcagttggtgccgcttcgcaaaccacaaatggagta
gtcatggtagaggacaagcgttatcgagcgatcaccgatgaggagctcgacagtatccta
cctggtgttgtagatggttatgtgatcatcgaagtcccggacgactacaagccggcacct
tccgttcgaaaattggtcccggctcagacttctgatggcttcatgatgcaagacgatgcc
gatgctgtgagggcgaggacggcagctggcggtttgcagggtacgacggagcagactgag
attgaagggattgggactctgcagttcttgaagccagaggatacgcagtacttcgccaag
attttgggagatgggggtggtgaggaagatgacattgggtacaccactgaagagctgaag
gagcgcaaaatcatgcgattattgttgaagatcaagaacggaacgccacctgtacgtaaa
tcagcgttacgacaaatcaccgaccgcgctcgagaattcggagccggacccctgtttgac
aaaatattacctctcttgatggagcgttcccttgaggatcaagaacgacatttacttgtc
aaagtcatcgaccgagttctctataaacttgacgacctggtgcgaccttatgttcacaag
atcctggtcgtgatcgaacctctcctcatcgatgaggactattacgctcgggtagaaggt
cgtgagatcatcagtaaccttgccaaagctgccggtctagcccacatgatttcaaccatg
cgtcccgatatcgatcatgtcgacgaatatgtcagaaataccaccgctcgtgcatttgcc
gtagtcgcctcagccctcggcatccccgctcttctccccttcctgaaagctgtctgtcgc
tcgaagaaatcctggcaagcccgacacacgggtattcgtatcatccagcagattgctcag
atgacaggttgtgcggttcttccacatctacggaacttggtcgatgcagttgcagatggt
ctgcaagacgaacaacaaaaggtccgtaccatgactgctcttagtctggctgccttggcc
gaatctgccgcaccttatgggattgaatccttcgacaacgtgctcaaacccctctggttg
ggcatccgacagcatcgagggaaaacgctcgccgccttcctcaaggccatcggctacatc
attcctctcatggaccccgagtatgccggctactacgttcgagagtgtatgccgattctc
atccgtgagtttcggacatctgacgaggaaatgcgacgcatcgttctccaagtcgtcaag
caatgtgctggaacggaaggtgtgacccccacgtatatcaagactgaagtcttgccggag
ttctacaaagctttctgggttcgtcgaatggctctcgaccgacggaattacaagcagctc
gtggacacaactgttgagctcgcgcagaaagccggtgttgccgaaattgttggacgaatt
tgcaatgatctaaaggatgagtccgagcccttccgtaaaatggtcatggagaccatcacc
aaggtcattgccaacacgggtgccgccgacattgacgagcgtctagaagtgcaactcatc
gacggtatcatcttcgctttccaggagcaaactcttgaggatacgatcattttggatggc
ttcagtacggtggtcagtgctctcggtggtcgagtaaaaccgtatcttccccaaatcatc
tcaatgattctctggcggctcaccaacaagagtgccaaagtccgaatgctcgccgctgac
ctgaccacgaaactcgctcctatagtgaagagcaacggggaggatcatctgttgagtaag
ctgggagttgttatcttcgagcaattgggtgaggaatacccggatgcactcggaagtttg
attgccgcagagggagctatcgccaacgttgttggtatgacgcagatgaacccgcctgtc
aaggatctcctcccacgtatgacccctattttgagaaatcgtcacgagaaagtgcaagag
gcaactatcaatcttatcgggcgtatcgccgatcgaggagcagagtttgtgcctgccaaa
gaatggatgcgaatctgtttcgaactgctcgatctcctcaaagcacataaaaaggcgatt
cgacgagcagctgtcaactcgtttggctacatagccaaggctatcggtcctcaggacgtt
ctcagcgttcttctcacaaacctcaaggtacaagaacggcaaagtcgagtctgcagtacc
gtcgccattgccattgtagccgagacgtgtgggcccttcacttgtatccctgccatcctc
aacgaatatcgcacaccagaactcaacgttcgtaacggttgcctcaaggccctggcgttc
gtcttcgaatatgtcggtgaaatgtctaaagactacatccactctgtcgtcggcctgctg
gaagacgccttgaccgatcgtgatcacgtacatcgacagacggcatgcgccattgtgaag
catcttaccatcggggtcgctggtctcggctacgaagaggccctcacgcacctgctcaac
ctcgtgtggcccaacatcttcgagacgagtcctcacgtcattggtggagtcatggacgcc
atagaggccatgagattaggtgtgggccctggtgtggtgctgtcatatgttctgcagggc
atgtttcatcccgctcgtagagtccgtgaggtttactggcggatgtataacaccctgatc
ctcggttcttccgattctttggtgcccttctaccccaatctcggttcagcgtcggatttg
gcttctgggcaagattacactagacatcacctgatgatgtcgatatga

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