Tremella mesenterica: TREMEDRAFT_41611
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Entry
TREMEDRAFT_41611 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tms
Tremella mesenterica
Pathway
tms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TREMEDRAFT_41611
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tms01007
]
TREMEDRAFT_41611
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_41611
Enzymes [BR:
tms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
TREMEDRAFT_41611
Amino acid related enzymes [BR:
tms01007
]
Aminoacyl-tRNA synthetase
Class II (A)
TREMEDRAFT_41611
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TREMEDRAFT_41611
Prokaryotic type
Other AARSs
TREMEDRAFT_41611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
18493260
NCBI-ProteinID:
XP_007000931
JGI:
Treme1_41611
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MLKAFHTLTFALSRPTASVQISRNNHIANRVNFLRTPNNRSFNMSAPEANLHKDEETGEM
VSKSELKRRINARQKLAQKAEKALKAPVQASKPNTAEAEAEMDAAQFYAMRFNAIKQLRQ
TKNPDPYPHKFHVTHGIPTFIKQWGPDGVLASGTTLEKEQPISLAGRVMSIRTSSSKLIF
YDLKADGEKVQVMASAQAAPSLDAFLDSHNVIRRGDIIGVTGVPSRTKAGELTIYVSEVK
LLSPCLHQLPGREGVVDMETRYRKRYLDLIMNHSTRDVFITRSKTINYIRRFLDDMGFLE
VETPMMSMIAGGATAKPFITHHNDLKLDLFMRIAPELYLKELVVGGLDRVFEIGRVFRNE
QIDMTHNPEFSICEFYMAYADMYDLMDMTEDMISGLVKRLTGGTKITFHPQGRGEGKKTY
EIDFAKPWKRFDMIGELEKQLEVKFPPGETLHDENANKFLRDLCAKHNVDCPEPKTNARM
LDKLVGEYIESQCINPSFIVGHPQVMSPLAKYHRSRPGLCERFEAFVATKEICNAYTELN
DPFDQRERFLEQTRQKDQGDDEAQGVDETFINALEYGLPPTGGWGLGIDRLVMFLTDSAN
IKEVLLFPAMRPVVANSIEAIAPAVKASDAAKEE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaagcttttcatacactcactttcgcactttcacgtccaacagcatccgtacag
atctcacggaataaccatattgcaaacagggtcaattttctacgaacacccaacaatcgt
tcattcaacatgtccgctccagaggctaaccttcataaagatgaagagacgggggagatg
gtctccaagtccgaattgaagagaagaatcaatgcgagacagaaattggctcagaaagct
gagaaagctctgaaggcacctgttcaagcttccaagccgaatacagcggaggcagaggct
gagatggatgcggcgcaattctatgccatgagattcaacgctatcaaacaattacgtcag
acaaaaaatccagatccttatcctcacaaatttcatgtcacccatggaattcctactttc
atcaaacaatggggccccgatggggtgcttgcgtcggggaccactttggaaaaggagcaa
ccgatctctttggcaggaagggtcatgtcgatccgaacatcatccagcaagttgatattt
tacgatctcaaagcggatggagaaaaggtccaggtcatggcttctgctcaagccgcccct
tctctcgacgcctttctcgattcacataatgttatacgacgaggcgacatcatcggtgtt
accggggtaccttcacgtacgaaagctggcgagctcactatttacgtttccgaagtcaaa
cttctctccccttgtttgcatcaacttccaggtcgagaaggggtggtggatatggagacc
agatacaggaaacgatatctcgatctcatcatgaatcattccaccagggatgttttcatc
acacgaagtaagaccatcaactacatcaggagattccttgatgacatgggattccttgag
gtcgaaacaccgatgatgtccatgattgccggaggagctactgctaaacctttcatcact
catcacaacgatctcaaacttgaccttttcatgcgtatcgcccctgaactttacctcaaa
gaactcgtggtcggaggactagacagagtttttgaaatcggtcgtgtgttcagaaacgag
caaatcgacatgacgcacaaccccgagtttagcatttgcgaattttacatggcctatgcg
gatatgtacgatttgatggatatgacggaagatatgatttccggtttagtgaagagactc
acgggagggacaaagataacttttcatccacaaggcagaggagaggggaagaagacgtat
gaaattgattttgctaaaccttggaaaaggtttgatatgattggtgaattggagaaacaa
ttggaggtcaagttcccaccaggggaaactttgcatgatgagaatgcgaataagttcctc
agagatttgtgcgccaagcacaatgttgattgtcccgagccgaaaaccaacgctcgtatg
cttgacaaactcgttggagaatacatcgaatctcaatgtataaacccatctttcatcgtc
ggacatccccaagtcatgtcccccttagccaaatatcatcgttcccgtccaggtctatgc
gaacgattcgaagctttcgtagctaccaaagagatttgtaacgcctatacggaattgaac
gatccattcgatcaacgagaaagattcctcgaacaaaccagacaaaaagatcaaggtgat
gatgaagctcaaggtgtggatgagacatttataaacgctttggaatatggtttacctccg
acgggtggttggggtttaggaattgatagattggtcatgttcttgactgattctgctaac
atcaaagaggtcttgttattccctgctatgagacctgtggttgcgaatagtatagaggcg
atcgctccagctgtcaaagctagtgatgctgccaaggaagagtag
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integrated database retrieval system
