Tremella mesenterica: TREMEDRAFT_41874
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Entry
TREMEDRAFT_41874 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
tms
Tremella mesenterica
Pathway
tms04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
TREMEDRAFT_41874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_41874
Membrane trafficking [BR:
tms04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
TREMEDRAFT_41874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
18493293
NCBI-ProteinID:
XP_007000964
JGI:
Treme1_41874
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MSSTDLPPITLLLQEIQAVTSAMRRNQRWASATSLSTPSSQPLPPYLQASRLARRSRASS
QSNFNKKRGSSEGVEEGDLMDGFVELRRLLTGTNDVTTLDPLSLVQPFLALIRSSLTSGV
ITSLSLLSLHSIILNILPAFLTPLPTSIAPSTPLQIALAHTTATLSQCRFPSSSPQQDEL
VLLRLLRVIESLSLHFPLPNSSGTSSMLDQMGDESVCELLEVGLGMLARARLGEGLRNTA
QSCVQTLVKGCFTRLRRMSPEDMQRLMQAGTVVTVETKIGPKVKEQSPVVDASEGSGLDE
KTIEGDLKSSKPIEPSRPPFSPHGLPTILELLRVLIALLNPSDQAHTDSMRLSALAILNT
ALEVGGTSLGRWPELREGVRDEGCRYLFQLTRSDSPALLTQSLRTTSTLFSTMLPHLKLQ
LELFLSYLIDRLTPPTPPPFPQIMTQSHSRPVSPVSGAVDGTPDPQRSKQAGTPSIDMHT
PGHSTPKPISLLPPVPGETKELMLETLSQIALRPSFMVDCWTNFDCSTESENIFERLISF
LTRGVYPSGPPKADGSTHIFEGLENTQLLSLEILLTYVASMASRLEHGGESWPSQAPPAQ
LLDERKSRKGVLLTGAAMFNAKPKNGLAYLEKNGIIVPEPGEGNVEERRLRAIAQFLRHS
TRLDKKLLGEYISRPDQLDLLKAFIGLFDFKGKSIADAMRELLETFRLPGESQPISRITE
TFAEHFISFNPPEIASQDAVYVLAYSVIMLNTDLHNPQNRKRMTIDDYKRNLRGVNDGKD
FDPEYLAAIHESIKKREIILPEEHVGQPGFDYAWKGLMQRSRTAGPMIVCNTSVFDEAMF
RASWRPLISAIAYAFTLSAQDEHVIQRAITGFRQCASLAGHFHLPEVFDTIVQSLAPATG
LLEDSNDDYQMTNYPVVDKDNTSLTVSPLSVRFGQSYRSQLTTVVLFTIANGNGNAIRQG
WGQIFEMFQTLFIHSLLPPPMLQMEDFLAGTSMIPMKTAAPAPVPERRPEGGLLSTLSSY
LLSPYGASEDRLVVETSDEDVENTLVAVDCLSSCKLEELYAEILHLEVEALIPALKALRS
LAEARTTGRLAARNELRAENSPGLRHEGQLPYDPTCVFHLEMMVSLASRGKPHIAETWPI
TFEYISSLLSSAQSYSVLLIERAVVGLLRLCLVVSETADLRDQLYIALDVLRSLPSTVLN
AVSEQLMAGIAKILEKDSSVVKSHTEWGLIIALFRATVAHPEASKVTLAIVQKMAAGGDS
YPGLSEDNYAGVVALLDEFATAAGAAGVGRGRRASQSATLGPTVERGLSALDSLYGLRNV
IPDLMESSGLSGQDGWNTFWLPPLLAISKQCVNIHHSIRQRAIAHLQRLLTSPQLLSTEQ
ALATIFDRVLFPIMDELLKPQVYERDPSGMGETRLRAATLLCKVFLQYVVRLAEGNLISG
MFVRVLDRLERFMKGEKEMLNEATESLKNVILVMYSSDLLLPPPSSSDIADTRTKEQREI
WTSGAERIERVLPGFLAEAMKPTEPQRSSPVKSGTTVA
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaccgatctcccacccatcactctcctactacaggagattcaagctgtcacg
tctgctatgaggcgtaatcaacgttgggcttccgccacatccctttccacaccttcatct
caacccctgcccccctaccttcaagcctctcgactcgctcgtcggtcccgtgcttcttct
cagagtaacttcaacaagaagcgtggctcctcagagggtgtggaggaaggtgatctcatg
gatggttttgtagaacttcgtagactgctcactggcaccaatgatgtgaccactttagat
cctctgtcattggttcaacctttcttggcattgatacgatcttctctcacatctggagtt
atcacctcattatcccttctatcccttcattcgattattctcaatatcttaccagcattc
ctcacacctttacccacttctatcgcaccttccacgcctcttcaaatagctctcgctcat
acaactgccactctctctcaatgtcgcttcccctcctcttctccacagcaagatgagctg
gtgctactgcgtcttttgagggtgatagagagtctttctctgcatttcccccttccaaac
agtagtgggacgtcaagtatgctggatcaaatgggagatgagagcgtgtgcgagctgctc
gaagtgggtcttgggatgttagcacgtgcgaggctgggagaggggttgaggaacactgcc
caaagctgcgtacaaacattagtaaaaggatgcttcactagactgagaaggatgtcacct
gaagatatgcaaaggcttatgcaggctggtacagtggtgacggtggaaacgaagatcggg
ccaaaggtcaaggagcagtcacctgtagttgatgcgagtgaagggtcggggttggatgag
aagactattgagggagatctgaagtcatcgaaaccaatagaaccttcaaggccaccgttt
tcaccccatggtttacccactattctggagcttcttcgcgtcctcattgcccttctcaac
ccttctgaccaagcccacacggactcaatgcgcctctcagccctcgccattctcaacacg
gcactcgaagttggcggcacctctcttggccgttggccagaattacgtgaaggtgtccga
gatgaaggttgtcgatatctctttcaactcactcgttccgactcaccagctttgctcacg
caatcccttcgcaccacttccactctattctccaccatgctccctcatctaaaacttcaa
ctcgagctttttctctcgtacctcatcgaccgtctcactccacctactccaccgcctttc
cctcagatcatgacacagtctcacagcagacctgtgtcgcctgtatctggggccgtcgat
ggtacgccagatcctcaacgatcgaaacaagctggaactccaagcatcgacatgcacact
cccggtcattccacccccaaacccataagcttgctgcctcctgttccaggtgagacgaaa
gagctcatgctcgaaacgctatcccagatcgctcttcggccaagcttcatggttgactgt
tggacaaactttgactgttccactgaaagcgaaaatatcttcgaacgactgataagcttc
ttgacccgaggtgtttacccctcggggccgccaaaggctgacggttccactcatatcttc
gaaggtctggaaaacacacagctactttctctcgagatcctcctcacatatgtcgcttcc
atggcttctcgcttagagcacggaggagaatcttggccatcccaagctccgccggcccaa
ctccttgacgagcgcaagtcacgcaaaggcgtccttctcacaggtgcggccatgttcaac
gccaagccaaaaaatggtctcgcgtatttggagaaaaacgggattatagtccccgaacct
ggcgaagggaacgtagaagaacgtcgacttcgagcgatcgcccaatttctacgtcactct
accagactcgacaagaaactattgggagagtacatttcacggccggatcaattggacctg
ctcaaggctttcatcggattatttgacttcaagggtaaatctatcgctgatgccatgaga
gagttattggaaacttttcgtttgcctggagagtcacagcccatctctcggatcactgaa
acgtttgcagagcatttcatctctttcaaccctcccgagatcgccagtcaagatgccgta
tatgttctggcgtactcggtcatcatgctcaataccgatctccataatcctcagaacagg
aaacgtatgacaatagacgattacaagcgcaacttacgaggtgtcaatgatggcaaagac
tttgatcccgaataccttgccgcaatccacgaatccatcaagaagcgcgagatcatcctc
cctgaagaacacgtcggtcagcctggttttgactatgcctggaaaggtcttatgcagcgt
tcccggactgctggccccatgatcgtctgcaacacatccgtattcgacgaagcaatgttc
agagcttcatggcgacctttgatttctgccattgcctacgccttcacattgtcggctcag
gatgaacacgtcatacaacgcgccatcacaggattccgtcagtgtgcctctctagctgga
cacttccaccttcccgaggttttcgacacgatcgtccagtctctcgcacccgccacagga
ctgcttgaggactcgaacgatgattaccagatgaccaattatcctgtcgtcgataaagac
aacacgtcgctcaccgtttcacctctttccgtccgcttcggtcaatcatatcgatcacaa
ctcactaccgtggtactgttcacaatcgccaatggaaacggtaacgccatacgacagggt
tggggtcaaatcttcgagatgttccaaacacttttcattcactcactgctccctcctccg
atgcttcagatggaagactttctcgctggaacaagtatgattcccatgaagacagcagcg
cctgcaccagtgcctgagcggagaccggaaggcggattgctttcgactctgtcatcctat
ctcctcagtccgtatggtgcgagtgaggatagattggtggtggagactagtgatgaagat
gtggagaacacgttggttgcggtcgattgtttatcatcttgcaagcttgaagagttatac
gcggaaattttacacctcgaagtggaggctctcattcctgcactcaaagctcttcggtct
ctggcggaagctcgtaccacaggcagattagccgcgagaaacgaactccgtgcggaaaat
tccccaggtttacgacacgaaggacaactcccatacgaccccacctgtgtcttccacttg
gagatgatggtcagtctggcaagtcgtggcaaacctcatatcgccgaaacttggcctatc
acattcgaatacatttcatccctcctgtcttccgctcaatcttacagtgttttactcatc
gaacgagccgtcgtcggcctactgcgactatgtctcgtcgtatctgagactgcagacttg
cgggatcaactctacattgctctcgacgttttacgttcgttgccgtccacggtgctcaac
gcggtctcggaacaactcatggctggtatagcgaagattctcgagaaagattcatccgtc
gtcaaatctcacacggaatggggtttgatcattgctttattcagagctactgttgctcat
cccgaagcttccaaagttacattggctatcgtacagaaaatggctgctggaggagatagt
tatcctggtttgagtgaagataattatgctggggtcgtggcgttgttggatgaatttgcc
actgctgctggggctgctggtgtggggaggggaagaagagctagtcaaagtgcgacgttg
ggacctacagtggagaggggattatcagctctggattcgttgtatgggttgaggaatgtg
attccggatttgatggagagtagtgggttatcaggacaagatggttggaatacgttctgg
cttcctcccttactagcaatttccaaacaatgtgtaaatatccatcattccatacgacaa
cgtgctattgcgcatttacaacgtctactcacttctcctcaattattatctaccgaacaa
gccctagcgaccatcttcgatcgtgtcttgtttcctatcatggacgaacttctcaaaccg
caagtctacgaacgagatccatcagggatgggagagacaagattacgagctgcaacattg
ttatgtaaagttttcttacaatacgttgtgagattggcagaagggaatttgataagtggt
atgtttgttagagttttagataggttagagaggtttatgaagggtgaaaaggaaatgctt
aatgaagctactgaatctttgaaaaacgttatactcgtcatgtattcttcagaccttctt
ttacctcctccttcctcatccgacattgccgatacacgcacaaaggaacaaagagagata
tggaccagtggagcagagaggatagaaagggttttacctggtttcttggcggaagctatg
aaacctacggagcctcagaggagttcaccggtgaagagtgggactactgttgcgtga
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integrated database retrieval system