Tremella mesenterica: TREMEDRAFT_42004
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Entry
TREMEDRAFT_42004 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K16578
CLIP-associating protein 1/2
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_42004
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tms04812
]
TREMEDRAFT_42004
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
TREMEDRAFT_42004
Cytoskeleton proteins [BR:
tms04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
TREMEDRAFT_42004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT
CEP104-like_TOG
XMAP215_CLASP_TOG
TTI1
HutF_N
Motif
Other DBs
NCBI-GeneID:
18493307
NCBI-ProteinID:
XP_007000978
JGI:
Treme1_42004
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MSSNPVTGEEVEAFLTKLKAADAEKKVDQLQLFSLRIDGAEQLPDTTIDPITLLVAPLLK
SSAHLLVAAVLTSFLPVFLPLIPDDPPANHLRLALHQFLPLLLEKLNDQKERVHSAAASA
LTILGKKCYESEPPSLGASTTKGKSREGLVELWERGMKDVLGNKGWRGKVEGMKAILEMR
RDMGSKLPLKPWLAPLVGLLEDSDGNVRDQARETVVALLSPANTPAAARAELKKLMQARN
VRKTIADGIISRIFSNGAAVAIIAADIPLPADDAPVSTLGTRSGAVTPAHDEVEVVYVNT
AKELEQEFSEMIPHFAGKETEHNWLPREKAIIRIRGILRTTVAQQSCAVVTELAETLGPA
FDHFVELILPVLGKMAGFTKKIIAERSQRSVSAIIEHTTVHPRIFISHISSGVSGKNIQA
RHACTGHLKTFLDVHGIRSKHSIETTSGLLDMIDTTVRTSLVDVNPQVRDLARLAFWSYH
AVWPQKANVIMTSMDNIARKQLEKARTGETNGVALTTRPPAPAKRASSAISAVLAEKKRA
RAAELAAGKSTGSPRIVSSPVPASPVPSLPSGTPRSTSSTFISSKKPGPFPRTVSSPGSS
SEGSPRPRRTSTRPVENGIGSEVKKRTSSLSRPLSSNPSSRESSTSRQSPLRQFNTYPNN
SHTPTSQSSSAASTQVVRTPTLNRKHLPSFSGHSTPSDNIETGVGLGLVNSSEIHPEHRK
RIAETEAATQRLEAYSVSHPGTTPFTPKVHHGGSLQTPINGMMRNHAWVDSPRSDLMTPM
ILDKLKERKHERSWWLKRQQLLDKASPLKSTTNTPSSAITEDVISLEKGNPEIRNLQKLA
LFSSSHPISQSTMESEDEFESDKSIWNEGRLFERVFDGLVAYLEPTKPFDLLEQALVVLW
EMVQHQWDMFEDHETTLCDALFRLRACKSSIILESTNSLISFLTEVSDPLFLLSVLSASL
DRYLVRHPPEEMERIMEKLDISTSSTINGAETGQKVLRGEKARASGYSFGLNAMGMCVLR
LPKEVVRIEGKNLAGIIMTALSSPTITTRQAANTLILALQCVLQDAQETLGLLPELNAGQ
KDLAMYLMDKNGLLVDLLPGESGGREGVMGEMTELMARSARG
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaaccctgtgaccggggaagaagtggaggcattcttgaccaaactcaaagcc
gccgatgccgaaaagaaagtggatcagcttcaattattctcccttaggatcgatggcgca
gagcagctacctgatacaactatcgaccccattacactcctagtcgcacctttattaaaa
tcatcagcacatctactcgtagctgccgtcctcacctccttccttcccgtattccttcct
ctcatccctgatgacccccctgcaaaccacctccgtctagcattacatcagtttctccct
ttgctcctggagaaacttaatgatcagaaagaacgagtccacagtgcggcggcgtccgct
ctgaccatactgggaaagaaatgctatgaatctgaaccgcctagcctaggtgcatcgacc
actaagggaaaaagtagagagggtctggtggagttatgggaacgtgggatgaaagatgta
ttagggaataaaggttggaggggtaaagtagaagggatgaaggctattctggagatgagg
agagacatgggtagtaaactaccgctgaaaccttggctggccccattagtgggactgtta
gaagattcagatgggaatgtaagggatcaagctagagaaaccgtggtcgctttgctgtca
ccagccaatactccagccgccgcaagagccgaattgaaaaaattgatgcaagcgcgaaac
gttcgtaagaccattgcggatggaatcatcagtcggatcttctctaacggagccgcggta
gcaatcatagccgcggatatacctcttcctgctgacgacgcgcctgtttcgactttgggt
acaagatcaggggctgtcactcctgctcatgatgaggttgaagtggtatatgtgaataca
gcgaaggagttggaacaggagttctcagagatgattcctcactttgcgggcaaagagaca
gagcataattggctaccgagggagaaagccattatacggatacggggaattctccgaacc
accgtagctcaacaatcttgtgccgtagtgaccgaactggcggaaactctcggtccagct
ttcgatcattttgtcgaactcattctacctgtgctcgggaaaatggccggcttcacgaag
aagattattgcggaaagatcgcaacgttcagtcagcgctataatcgaacataccactgtt
catccgcgtatcttcatttcccacatctcttcaggagtcagtggtaaaaacattcaagct
cgacatgcctgtactggccatctaaagacctttctcgatgttcatggaatcaggtctaag
cattctatcgagaccacctctggactattggacatgatcgataccactgtcagaacgtcc
ctggttgatgtcaatcctcaagtccgagatcttgcacgattggcattctggagctatcat
gccgtctggccacaaaaggcaaatgtcattatgacttccatggataatatagctcggaaa
caattggaaaaagccagaacgggagaaaccaacggagtggctttgactaccagacctccc
gctcctgcaaaacgtgcgtcgtcagctattagcgctgtattggcggagaagaaaagagcg
agagcggcggaattggcagctggtaaaagtaccggatctccaaggatcgtctcctcccct
gttcctgcttcacccgtaccatctttgccctccggcaccccaagatctacctcttcaact
ttcatctcttccaagaaacccggaccattcccacgaacggtctcttctcccggttcctcg
tctgaaggttcaccccgtccacgaagaacgtcaacgagacctgtcgagaatggcattggt
tctgaagtcaagaaaaggacgtcaagtctgagtagaccattatcttccaatccatcttct
agagaatcatctacaagtagacaatctccattaagacaattcaatacatatcctaataat
tcacatacacccacttcacagtcaagcagtgcagcatccacacaagttgttcgaactcct
actcttaatcggaaacatttgccttcattctccggtcactcgacaccttctgataacatc
gagacaggtgtcggcttgggtctggtgaactcatcggagatacatcctgagcacagaaaa
cggattgcagaaactgaagcggcgacacaacgattagaagcttattccgtgtcacaccca
ggtacaaccccattcacccccaaagtccatcatggtgggtcgttgcagacgccaataaat
ggtatgatgaggaaccatgcatgggtcgactcacccaggtcggatctgatgactccgatg
atattggacaaacttaaggagaggaaacatgagaggagttggtggttgaaacgacagcaa
ttactggacaaggctagccctctcaaatctaccaccaacaccccttcgtctgcaataaca
gaagacgtcatatctttagagaaaggtaatcccgagatacgcaatcttcaaaagctcgcc
ttgttctcttcttctcatccaatctctcaatctactatggaaagtgaagacgagttcgag
tcggataaaagtatttggaacgagggacgattattcgaacgtgtcttcgatggtctcgtg
gcttacttggaaccgacaaagccatttgatctgctagaacaagcgttagttgtcttatgg
gaaatggtacaacatcaatgggacatgttcgaagaccacgagacaacactttgtgatgct
cttttccgtctacgagcttgcaaaagttcaatcatactcgaatctaccaattctctcata
tcatttttgacagaagtatcagatcctctattcctcctttctgtcctatcagcgtcttta
gatcggtatctcgtccgccaccccccggaggagatggaaaggatcatggaaaaattagat
attagtacttcttccacgatcaacggggcggaaacaggacaaaaggttctcaggggtgag
aaagctagagcttcgggttattcgtttggattgaacgcgatgggaatgtgtgtgttgaga
ttacctaaggaggttgtgaggattgaagggaagaatttagcgggaatcataatgactgca
ttatcatcaccgacaatcaccacacgtcaagctgccaacacactcatcctcgcccttcaa
tgtgtattacaagatgcacaagaaacacttggacttttacccgaactgaacgcaggacag
aaagacctagccatgtatctgatggataaaaacggacttttggttgatcttttacctggg
gaaagtggaggaagagaaggggtgatgggtgaaatgacagaattaatggctcgtagtgcc
agggggtga
DBGET
integrated database retrieval system
