Tremella mesenterica: TREMEDRAFT_42329
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Entry
TREMEDRAFT_42329 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K07897
Ras-related protein Rab-7A
Organism
tms
Tremella mesenterica
Pathway
tms04138
Autophagy - yeast
tms04144
Endocytosis
tms04145
Phagosome
tms04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
TREMEDRAFT_42329
04145 Phagosome
TREMEDRAFT_42329
04138 Autophagy - yeast
TREMEDRAFT_42329
04148 Efferocytosis
TREMEDRAFT_42329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_42329
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_42329
04031 GTP-binding proteins [BR:
tms04031
]
TREMEDRAFT_42329
Membrane trafficking [BR:
tms04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
TREMEDRAFT_42329
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TREMEDRAFT_42329
Exosomal proteins of other body fluids (saliva and urine)
TREMEDRAFT_42329
Exosomal proteins of colorectal cancer cells
TREMEDRAFT_42329
Exosomal proteins of bladder cancer cells
TREMEDRAFT_42329
GTP-binding proteins [BR:
tms04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
TREMEDRAFT_42329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
ATP_bind_1
PduV-EutP
AAA_16
nSTAND3
cobW
AAA_22
Septin
AAA_24
AAA_7
LXN
AAA_5
ATPase_2
Ribonuc_red_2_N
DUF6614
SRPRB
NACHT
NB-ARC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18493349
NCBI-ProteinID:
XP_007001020
JGI:
Treme1_42329
LinkDB
All DBs
Position
Unknown
AA seq
206 aa
AA seq
DB search
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQ
LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDPENFPF
VVLGNKIDMEESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKNALAQEA
ETELYADYPDPIRIDSESSQNYGCSC
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcatctagaaagaaggtccttcttaaggtcatcatcctaggggattccggtgtcggt
aagacatcgttaatgaatcaatatgtcaacaagcgtttttcaacccagtacaaagctacc
atcggcgccgatttcctcacccgtgagcttgtcgtggacgatcgtgtcgtcaccatgcag
ctctgggataccgccggtcaagaaagatttcagtccctgggtgtggctttttaccgtgga
gccgattgttgcgttctggtgtacgacgtgaacagttcgaaaagttttgaagctttggat
ggatggagagatgaattcctggttcaagcatcaccacatgatcccgagaacttcccgttc
gttgtgctaggaaacaaaatcgacatggaggagtctaaacggatggtatcgcaaaaacga
gcaatgacatggtgtcaagccaagggcaacattccttactttgagacttcagcaaaggag
gcgatcaacgtcgagcaggcattccagaccatcgctaagaatgctttagctcaggaggca
gagacggagctgtatgccgattatcctgatcctatcaggattgactcggagagctctcag
aattacggatgcagttgttag
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integrated database retrieval system