KEGG   Tremella mesenterica: TREMEDRAFT_42539
Entry
TREMEDRAFT_42539  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
tms  Tremella mesenterica
Pathway
tms04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    TREMEDRAFT_42539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tms03019]
    TREMEDRAFT_42539
   03009 Ribosome biogenesis [BR:tms03009]
    TREMEDRAFT_42539
   04131 Membrane trafficking [BR:tms04131]
    TREMEDRAFT_42539
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tms04147]
    TREMEDRAFT_42539
Messenger RNA biogenesis [BR:tms03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     TREMEDRAFT_42539
Ribosome biogenesis [BR:tms03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    TREMEDRAFT_42539
Membrane trafficking [BR:tms04131]
 SNARE
  SNARE associated proteins
   Others
    TREMEDRAFT_42539
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    TREMEDRAFT_42539
Exosome [BR:tms04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TREMEDRAFT_42539
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_33 AAA_5 AAA_2 AAA_16 TIP49 CDC48_2 AAA_22 AAA_14 Mg_chelatase nSTAND3 RNA_helicase AAA_28 Parvo_NS1 AAA_7 NPHP3_N AAA_17 IstB_IS21 Vps4_C AAA_18 DUF815 AAA_24 ResIII Sigma54_activat ABC_tran AAA_25 TsaE AAA_3 PhoH NACHT NB-ARC KAP_NTPase Molydop_binding
Other DBs
NCBI-GeneID: 18493373
NCBI-ProteinID: XP_007002521
JGI: Treme1_42539
LinkDB
Position
Unknown
AA seq 810 aa
MADDPSKAKVEDSTATAILRGKKTPNRLIVDESPSDDNSVGIMHPNTMEILGLFRGDTII
VRGKKRKDTVLICLSQDDVEEGKIAMNKVARANCAVRLGDLAHVSAANDIKYGKRIHVLP
FADSIEGLSGNLFDVFLRPYFLEAYRPIRKGDVFQVRGGMRTVDFKVIEVDPAPYCIVAS
DTVIHTEGDPVDREAEEQNLNNVGYDDLGGCRKQLAQIRELVELPLRHPQLFKAIGIKPP
RGVLMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP
AIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSIDPALR
RFGRFDREVDIGIPDPTGRLEILRIHTKNMKLSDDVDLEQIAADTHGYVGADIASLCSEA
AMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVNNPSALRETVVEIPTTTWND
IGGLDNVKRELQETVQYPVEHPEKFLKYGMSPSKGVLFYGPPGTGKTMLAKAIANECQAN
FISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKSRGGSSGDGGGAGD
RVLNQILTEMDGMNAKKNVFIIGATNRPDQIDSALLRPGRLDQLIYIPLPDEASRLSILK
ATLRKSPLAEGVNLEFLAKNTAGFSGADLTEICQRAAKLAIRASIEADMRKDREKKERVE
AEGGEEDLMDADEEDDEVPAISVEHFEEAMRFARRSVSDADIRRYEMFSTTLQQSRSFGN
NFKFPESTGGDTQAGGASFQNEADDDDLYA
NT seq 2433 nt   +upstreamnt  +downstreamnt
atggctgacgatccttccaaagccaaagtggaagattccacggcgactgctatcttgaga
ggaaagaagacaccgaacagacttatcgtcgatgagagtccatcggacgataattccgta
ggtatcatgcatcccaacactatggagatccttggtctgtttcgaggagataccattatt
gtccgcggcaagaagagaaaggacacggtactcatctgtctcagtcaagatgacgttgag
gaaggcaaaatcgctatgaacaaggtggccagggcaaattgcgctgtcagacttggcgac
cttgctcatgtatccgcagccaatgatatcaagtatggcaagaggatccacgtcctgccg
tttgccgactccatcgaaggtctatcaggtaacctctttgacgtatttttgcgaccatat
ttcctcgaggcgtaccgtcctattagaaagggcgacgtctttcaggtccgtggaggtatg
agaactgtagattttaaggtcatcgaagttgatccggcgccctactgcatcgttgcctcg
gacactgtcatccatactgaaggtgatcccgtcgaccgggaagctgaggaacaaaatctg
aacaacgttgggtacgacgatctcggtggttgcaggaaacaactggcgcaaatccgagag
ctcgtcgaacttcctctccgacatccccagttgttcaaggctatcggtatcaaacctcca
cgtggtgtgctcatgttcggtcctcccggtaccggtaagactttgatggcgagggcagtt
gccaacgagaccggtgcattcttcttcctcatcaacggtcctgaaatcatgtccaagatg
gccggagagtctgaatccaatctccgtaaagcatttgaggaggccgagaagaacagtccg
gcaattatcttcatcgacgaaatcgactcgatcgcgcctaaacgtgacaagaccaatggt
gaggtcgagcgacgtgtcgtctcacaactgttgacacttatggacggtctcaaggctcgt
tccaacgtggtcgtcatggctgctaccaacagacccaactcgattgaccctgccctccgt
cgttttggtcgtttcgaccgtgaggttgacattggtatccctgaccctaccggccgattg
gaaatcctccgaatccacaccaagaacatgaagctgtcagacgatgtcgacctggagcag
attgccgccgacacacacggttacgtcggtgctgatatcgcttccctttgctctgaagcc
gccatgcaacagatccgagagaagatggatttgatcgacttggacgaggatacgattgat
gctgaggttctcgactctctcggtgtgactatggagaacttccgattcgctctgggtgta
aacaacccctctgcccttcgtgagacggtggtggagattcctactaccacatggaacgac
attggtgggttggacaacgtcaagcgcgagcttcaagaaaccgtgcagtatcctgtcgag
cacccagagaagttcctcaagtacggcatgtccccttcgaagggtgtgctcttctacggg
ccacccggaacgggtaagaccatgttggccaaggccattgccaacgaatgtcaggccaac
ttcatctccatcaaaggtccggaattgctcaccatgtggtttggagagtccgaggcgaac
gtcagagatgtgtttgacaaggcgcgtgcggcggcaccatgtgtcatgttctttgacgaa
ctggattccattgccaagtctcgtggtggttcttccggagatggtggtggtgcaggtgac
agagtgctgaatcagattcttactgaaatggacggtatgaacgccaagaaaaacgtcttc
attattggcgctaccaaccgacctgatcagattgattctgcacttcttcgtcccggtcga
ttggaccagctcatctacattcctcttccagacgaagcatcacgattgtctatcctcaag
gctaccctgcgcaagtctcccctcgccgaaggagtcaacctcgagttcctcgccaagaac
actgccggattctctggtgcggatctcactgagatctgtcaacgcgctgccaagttggct
attagggccagtatcgaggctgatatgcgtaaagaccgtgagaagaaggaacgggtagag
gcagagggtggagaagaggacttgatggatgcggatgaggaggacgatgaagtgccggcg
atctctgtcgaacactttgaagaagccatgcgcttcgcacgtcgttccgtctccgacgcc
gatatccgtcgatacgaaatgttctccaccactctacaacagtctaggagctttgggaac
aactttaaattccctgaaagcactggtggggatacacaagcgggtggtgccagcttccaa
aacgaagccgacgatgatgatctgtacgcctga

DBGET integrated database retrieval system