Tremella mesenterica: TREMEDRAFT_42539
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Entry
TREMEDRAFT_42539 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tms
Tremella mesenterica
Pathway
tms04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TREMEDRAFT_42539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_42539
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_42539
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_42539
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_42539
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TREMEDRAFT_42539
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TREMEDRAFT_42539
Membrane trafficking [BR:
tms04131
]
SNARE
SNARE associated proteins
Others
TREMEDRAFT_42539
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TREMEDRAFT_42539
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TREMEDRAFT_42539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
AAA_5
AAA_2
AAA_16
TIP49
CDC48_2
AAA_22
AAA_14
Mg_chelatase
nSTAND3
RNA_helicase
AAA_28
Parvo_NS1
AAA_7
NPHP3_N
AAA_17
IstB_IS21
Vps4_C
AAA_18
DUF815
AAA_24
ResIII
Sigma54_activat
ABC_tran
AAA_25
TsaE
AAA_3
PhoH
NACHT
NB-ARC
KAP_NTPase
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
18493373
NCBI-ProteinID:
XP_007002521
JGI:
Treme1_42539
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MADDPSKAKVEDSTATAILRGKKTPNRLIVDESPSDDNSVGIMHPNTMEILGLFRGDTII
VRGKKRKDTVLICLSQDDVEEGKIAMNKVARANCAVRLGDLAHVSAANDIKYGKRIHVLP
FADSIEGLSGNLFDVFLRPYFLEAYRPIRKGDVFQVRGGMRTVDFKVIEVDPAPYCIVAS
DTVIHTEGDPVDREAEEQNLNNVGYDDLGGCRKQLAQIRELVELPLRHPQLFKAIGIKPP
RGVLMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP
AIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSIDPALR
RFGRFDREVDIGIPDPTGRLEILRIHTKNMKLSDDVDLEQIAADTHGYVGADIASLCSEA
AMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVNNPSALRETVVEIPTTTWND
IGGLDNVKRELQETVQYPVEHPEKFLKYGMSPSKGVLFYGPPGTGKTMLAKAIANECQAN
FISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKSRGGSSGDGGGAGD
RVLNQILTEMDGMNAKKNVFIIGATNRPDQIDSALLRPGRLDQLIYIPLPDEASRLSILK
ATLRKSPLAEGVNLEFLAKNTAGFSGADLTEICQRAAKLAIRASIEADMRKDREKKERVE
AEGGEEDLMDADEEDDEVPAISVEHFEEAMRFARRSVSDADIRRYEMFSTTLQQSRSFGN
NFKFPESTGGDTQAGGASFQNEADDDDLYA
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatccttccaaagccaaagtggaagattccacggcgactgctatcttgaga
ggaaagaagacaccgaacagacttatcgtcgatgagagtccatcggacgataattccgta
ggtatcatgcatcccaacactatggagatccttggtctgtttcgaggagataccattatt
gtccgcggcaagaagagaaaggacacggtactcatctgtctcagtcaagatgacgttgag
gaaggcaaaatcgctatgaacaaggtggccagggcaaattgcgctgtcagacttggcgac
cttgctcatgtatccgcagccaatgatatcaagtatggcaagaggatccacgtcctgccg
tttgccgactccatcgaaggtctatcaggtaacctctttgacgtatttttgcgaccatat
ttcctcgaggcgtaccgtcctattagaaagggcgacgtctttcaggtccgtggaggtatg
agaactgtagattttaaggtcatcgaagttgatccggcgccctactgcatcgttgcctcg
gacactgtcatccatactgaaggtgatcccgtcgaccgggaagctgaggaacaaaatctg
aacaacgttgggtacgacgatctcggtggttgcaggaaacaactggcgcaaatccgagag
ctcgtcgaacttcctctccgacatccccagttgttcaaggctatcggtatcaaacctcca
cgtggtgtgctcatgttcggtcctcccggtaccggtaagactttgatggcgagggcagtt
gccaacgagaccggtgcattcttcttcctcatcaacggtcctgaaatcatgtccaagatg
gccggagagtctgaatccaatctccgtaaagcatttgaggaggccgagaagaacagtccg
gcaattatcttcatcgacgaaatcgactcgatcgcgcctaaacgtgacaagaccaatggt
gaggtcgagcgacgtgtcgtctcacaactgttgacacttatggacggtctcaaggctcgt
tccaacgtggtcgtcatggctgctaccaacagacccaactcgattgaccctgccctccgt
cgttttggtcgtttcgaccgtgaggttgacattggtatccctgaccctaccggccgattg
gaaatcctccgaatccacaccaagaacatgaagctgtcagacgatgtcgacctggagcag
attgccgccgacacacacggttacgtcggtgctgatatcgcttccctttgctctgaagcc
gccatgcaacagatccgagagaagatggatttgatcgacttggacgaggatacgattgat
gctgaggttctcgactctctcggtgtgactatggagaacttccgattcgctctgggtgta
aacaacccctctgcccttcgtgagacggtggtggagattcctactaccacatggaacgac
attggtgggttggacaacgtcaagcgcgagcttcaagaaaccgtgcagtatcctgtcgag
cacccagagaagttcctcaagtacggcatgtccccttcgaagggtgtgctcttctacggg
ccacccggaacgggtaagaccatgttggccaaggccattgccaacgaatgtcaggccaac
ttcatctccatcaaaggtccggaattgctcaccatgtggtttggagagtccgaggcgaac
gtcagagatgtgtttgacaaggcgcgtgcggcggcaccatgtgtcatgttctttgacgaa
ctggattccattgccaagtctcgtggtggttcttccggagatggtggtggtgcaggtgac
agagtgctgaatcagattcttactgaaatggacggtatgaacgccaagaaaaacgtcttc
attattggcgctaccaaccgacctgatcagattgattctgcacttcttcgtcccggtcga
ttggaccagctcatctacattcctcttccagacgaagcatcacgattgtctatcctcaag
gctaccctgcgcaagtctcccctcgccgaaggagtcaacctcgagttcctcgccaagaac
actgccggattctctggtgcggatctcactgagatctgtcaacgcgctgccaagttggct
attagggccagtatcgaggctgatatgcgtaaagaccgtgagaagaaggaacgggtagag
gcagagggtggagaagaggacttgatggatgcggatgaggaggacgatgaagtgccggcg
atctctgtcgaacactttgaagaagccatgcgcttcgcacgtcgttccgtctccgacgcc
gatatccgtcgatacgaaatgttctccaccactctacaacagtctaggagctttgggaac
aactttaaattccctgaaagcactggtggggatacacaagcgggtggtgccagcttccaa
aacgaagccgacgatgatgatctgtacgcctga
DBGET
integrated database retrieval system