Tremella mesenterica: TREMEDRAFT_42572
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Entry
TREMEDRAFT_42572 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
tms
Tremella mesenterica
Pathway
tms00020
Citrate cycle (TCA cycle)
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
tms01200
Carbon metabolism
tms01210
2-Oxocarboxylic acid metabolism
tms01230
Biosynthesis of amino acids
Module
tms_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tms_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TREMEDRAFT_42572
Enzymes [BR:
tms01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
TREMEDRAFT_42572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Iso_dh
Med25_SD1
Motif
Other DBs
NCBI-GeneID:
18493379
NCBI-ProteinID:
XP_007002527
JGI:
Treme1_42572
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MIAPSLRNVTASVVRQGLRTPVNVSVSRRGMASLVDEKRLPAKFGGKYTVTLIPGDGIGK
EVADSVKEIFEALKVPVVWEQYDVSGETTGGEELFQQAMESLKRNKVGLKGILFTPIDQT
GHNSWNVAMRQTLDIYASVVVCKSLPGFPTRHENVDFAIIRENTEGEYSGLEHQSFPGVV
ESLKVSTRAKAERIARFAFDFALKNNRKKVTCVHKANIMKLGDGLFLNTCKRIAEQEYGH
TGIKFDSMIVDNTAMQLVSRPQQFDVMVMPNLYGAICANVGSALVGGPGVVPGCNFGREY
ALFEIGCRHIGKDIMGTNKANPSAMILSSTMLLRHLGLETQANTIASAVYDVIAEGQVRT
SDMKGSASTTDFTKAVLAKAMA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctccttcattgagaaacgtcacggcttctgtcgttcgacaggggcttcgaaca
cccgtcaacgttagtgtgtcgagaagaggcatggcctctttggtcgatgaaaaacgattg
cctgcaaagtttggaggtaaatacacagtcaccctcattcctggagatggaatcggtaaa
gaagttgcggattccgttaaagaaatcttcgaagctctcaaagttccagtagtgtgggaa
cagtatgacgtatctggagaaactacaggaggagaggaattgttccaacaggctatggaa
agtttaaaacgaaacaaagttgggttgaaaggaatcctcttcacacccatcgaccaaaca
ggtcataactcatggaacgtcgccatgcgtcaaacacttgacatttacgcttctgtcgta
gtttgtaaatccttacctggattccctacacgtcatgagaatgtcgattttgccattatt
cgagaaaataccgaaggagagtattctgggttggaacatcagagtttcccaggtgttgtg
gagagtttaaaagtttccactagggcgaaagcggagagaattgccagattcgcttttgat
tttgctctgaagaataatcgtaagaaagtcacctgcgtacataaagcgaacataatgaaa
cttggcgatggtcttttcctcaatacttgtaaacgtatcgctgaacaagaatacggtcac
acgggtatcaaattcgattctatgatcgttgataatactgctatgcaattggtcagtcga
cctcaacaattcgacgtcatggtcatgcctaatctttacggtgccatttgcgcaaatgtt
ggttcagctttagtaggaggaccgggtgttgtgcctgggtgtaactttggcagggagtat
gctctttttgaaatcggttgtagacacatcggaaaagacatcatgggcacaaacaaagca
aacccatcagccatgatcctgtcatctaccatgttgctccgtcatctcggacttgagaca
caggccaatacgatcgcttcggccgtatatgatgttattgccgaaggacaagtcaggacc
agtgatatgaagggaagcgcctccaccacagatttcaccaaagctgtccttgccaaagca
atggcttag
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