Tremella mesenterica: TREMEDRAFT_42693
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Entry
TREMEDRAFT_42693 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_42693
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_42693
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
TREMEDRAFT_42693
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
TREMEDRAFT_42693
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
TREMEDRAFT_42693
microRNA pathway
RISC loading complex
TREMEDRAFT_42693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoL2
ArgoN
PAZ
ArgoL1
DUF4971
TRAPPC-Trs85
Motif
Other DBs
NCBI-GeneID:
18493393
NCBI-ProteinID:
XP_007002541
JGI:
Treme1_42693
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MPPKGRADAGVEAITSGLSLSQIGGGQSDYAPRPGVGRAGRPITVSANMYQVRFKTDATG
SAPSVYHYDVEISPVVKVAKQKKPPRALLWKIWQQMLEQVQGGTKRSLEAAAFDQVKSMY
TPIKLFEGPKLEVIVNLVEDGKVPNDDKRRFRVVFQEATDNRGDTKQVDLQAVIDFCKKQ
RQTEMSNEMALTGVQATNVLMRQDVSARYTPVGAQGRRFFSTEGSVPISSGCTVYKGFTQ
SFRPTASGLPAIQLDTAYSAFINSGPLIVNVADSWTVAAGLLGMGGGGGGFRGGRGGGRG
DFRGGRGRGGFGGGGGGGVPDLQQLNRNQISKLNKILRNAKFTLTHRQTERVFSCKSLTF
QSADELQFLLNGRDGGPDRMVKIPQYFKETYNVTVTKPRLPCVMYGQKNYVPLEFVRISE
FNPMPFAQQTSEIAADMIRIAAKPPAERLKMIQDWRAKLNYSELPKIKAWGMQVQNQMLQ
AQARILPGPQVQYAGGKTVRQQGQWNLASKPRFFKANRPLESWSIANFDPRLSEPELKSY
FASFLESLSALGVIVTNKDVSVYNGSYEPFKQTSHGLPETLQTAARMAFMKKKVNPQLIF
VIMPKKDTMMYQDVKRYAASSLKLPVPTQCMQGEQIRKNSEQYKGNMAMKVHMKLGGVTH
VIKHQKVDATVMIMGADVSHPPNRGANLIQPSIAVTVATENGENVKYTPCLRLQDGRTEI
IRDLQSMTVAHLKLWRQNSKGALPKKIYMFRDGVSEGQYGIVVREEVQAIKAAAHEIQPE
YRPAITFVVCAKRHSMRFFATRAEDTDQRRNGNLQPGTVVDTAVVHPYAFDFYLQAHAGI
QGTAKPTHYIVVHDDNKFDADAMQTLVHDMCYSYGRATLSVSLIPPAYVSAIIAAKARDF
VYVEDPSEVATTLSAGETSQSAEYDPLALSEFLSFPTDVIADAPQRRGSKIPLVVSLPIR
NLV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaaaaggacgagcagatgcgggagttgaggctatcacttctggcctcagcctc
tcgcaaattggcgggggtcaatccgattatgcccctcgccccggcgttggtcgtgccggc
aggcccatcaccgtatctgcgaatatgtatcaagttcgcttcaagaccgacgccactggg
tctgcaccctcggtgtatcattacgacgttgagattagtcctgtcgtcaaagtcgctaag
cagaagaaaccgccgagggcccttctgtggaaaatttggcagcagatgttggaacaagtt
caaggaggtaccaagaggtctctcgaagcggcggcctttgatcaagtcaaaagcatgtac
actccgatcaagctttttgaaggtcctaagctcgaagtcatcgtaaacctcgtagaggac
ggcaaggtacctaacgacgacaagcgtcgctttagggtggtatttcaagaagcaaccgat
aatcgaggtgacaccaaacaagtcgatctacaagctgtcatagatttttgcaaaaagcag
cgtcagaccgagatgtctaacgagatggcactcactggtgtccaagccactaatgtgctt
atgcgccaggacgtgtcggcaaggtacacgcctgtcggtgcacagggtcgtcggttcttt
tcaaccgagggttcggtaccaatcagctctgggtgtactgtatataaaggtttcactcaa
tctttccggcccactgcatccggtctgcctgctattcagctagacactgcgtactccgct
tttataaactcgggtcctctcatcgtgaatgtcgctgactcctggactgttgcggccggc
ctgcttggcatgggcggcggcggcggcggcttcagaggcggacgtggtgggggtcgggga
gacttccggggcggacgaggacggggtggattcgggggaggtggtggtggtggcgtgcct
gacttgcaacagctgaaccgcaaccaaatcagcaagctcaacaagattttaaggaatgct
aaattcaccctaacccaccgccaaaccgaaagggtgttcagctgtaaaagtcttacattt
caatcagctgacgagctgcaatttctcctgaacggtcgagacggaggcccagacagaatg
gtcaagattccacaatacttcaaagagacatataatgttaccgtcacaaagcctcgtctg
ccatgtgtcatgtatgggcagaaaaattacgttccgctagagtttgtcaggatcagcgaa
ttcaaccctatgccgtttgcgcaacaaaccagcgaaattgccgccgacatgattcgcatc
gctgccaaaccccccgctgaacgcctgaaaatgatccaggattggagggcgaaactcaat
tactccgaactcccgaaaatcaaagcctggggaatgcaagtgcagaatcagatgctgcaa
gcccaagcacgaatccttcctggtccccaggtccaatacgctgggggcaaaacggttaga
caacaaggacaatggaatttggccagcaagcctaggttcttcaaggctaaccgaccgttg
gagtcatggagtatcgccaatttcgacccacgtctaagtgaacctgaactcaaaagctac
tttgcgtcattcttagagagtctgtcagccttgggtgttatcgtgacaaataaggatgtc
tctgtatacaatggttcctacgaacccttcaaacagacatcgcatggcctcccggagact
ctgcagacggctgcccggatggcgtttatgaagaagaaagtgaacccacagctcattttc
gtgatcatgccgaaaaaggacacgatgatgtaccaggatgtcaagcgatatgctgcctcg
agtttgaaactccctgtcccgacccaatgcatgcaaggtgaacaaattcgcaaaaatagc
gagcaatacaaaggcaacatggctatgaaagtacatatgaagctcggcggagtcacgcat
gtcattaagcatcagaaggtggatgctaccgtcatgatcatgggcgccgacgtttctcac
cccccgaacaggggcgccaacctaattcaaccatccattgcagtgacggttgccacagag
aatggcgagaatgtcaagtacacgccctgcctccgtcttcaagatggacgaacggaaatc
atccgagacttgcaatctatgacggtggctcacctcaagctttggcggcaaaactccaaa
ggcgccttaccgaagaaaatttatatgttcagagacggagtttcggaaggccaatacggc
atcgttgtgagggaagaagttcaagcgattaaggctgcagcccatgaaattcagccggaa
taccgaccagccatcacctttgttgtttgcgccaaacgacattcgatgcgcttcttcgca
accagagccgaagacaccgatcagaggaggaatggcaatcttcagcccggaacagttgtc
gacacagctgtcgtgcatccgtatgcattcgacttttatcttcaggctcatgcaggtatc
caaggaactgcaaagccgacccattacatcgttgtacacgatgacaataagttcgacgct
gacgcgatgcaaacgcttgtccatgacatgtgctactcgtatggtcgcgcaactttatct
gtctctctcatccccccggcttacgtgagtgctatcatcgccgccaaagctcgggacttt
gtgtatgtggaggatccgtccgaggtagcgacgactctgtctgccggtgagaccagtcaa
tcggctgaatatgatccgcttgccctgagtgagtttctgtcttttccgacggacgtgatt
gctgacgctcctcagagaagaggatcgaagatacccctagttgtgagtttacccatccga
aacctcgtctga
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