Tremella mesenterica: TREMEDRAFT_42787
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Entry
TREMEDRAFT_42787 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_42787
Membrane trafficking [BR:
tms04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
TREMEDRAFT_42787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_16
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
18493405
NCBI-ProteinID:
XP_007002553
JGI:
Treme1_42787
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MSGSWDRSTSPLHTLRTPHALRRVAWRPEHETELLVLPLNQPFGTSTPTPGSLDLFTSDD
DGHFEIWDVRRHYVAKYAIPSAAGNAVDAAWADDGTFVACFQAGGFAQCNLAEKAVPLEQ
VARQVMAWSPRGDLAYAVDQFRQGEIPFDDLRPGYFNHLDKVGQSNKSISSAPYEPLQAA
GTLRDIGTDEMAFEYMAYQYKVEGDAPENLCDWNRQVAQYCGHEADAGLWAFLQNLIEEF
SPSSDGQIFNEAIFTNSLRGGPSPLTPDASPRRKLNNLSLKDTLGTLPLSPASPITITLE
RIEEADQSQEAVEEMLSSSPSSSSDSSSAVSRSHSTNRFINFLPPELSQYSSTSVLTSSQ
IRDSTRPGSLLAQMNNHPKDISPPSDDDTPSPKPQPMSMSRILNDYPDPYGILPAAPSRG
ASSQATPTLRSETQNLRSAQMRGVSRPSLVTSSHKGGSQERRKEVRMVPMAKENEKEEDH
VWDKYREKRCATLVEWWLSHVDHGDIQLATTIFIVGSCAVDFPRQQCERLVHAYVDLLER
YKLFLPASYIRQYAGFDTLHVTPFDEGMTHILFCQRCQRPTGSLEDIDVKGKKFWWCKRC
KLAAQHCAVCHESVKGLRLGCNKCHHGGHQSCMRRYYLKAESQPQPKAPPVSFPQLGTQR
FTPDDQPSGSRVTLSVSVTTTATTTTRSSEGKSGSGEITMTLCPAGCGCKCRIVVRPLEP
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtccggttcttgggaccgatctacctcaccacttcacaccctacgcacgccacatgct
ctccgtagagtcgcttggagacctgaacacgaaactgaacttctagtccttcctctcaat
caaccttttggtacctcgactcccactcccggatcactggatcttttcacttccgacgat
gacggtcattttgagatctgggacgtgagaagacactacgttgccaaatatgcgattcct
tctgccgctggtaatgccgtcgacgccgcatgggctgatgacggtacgtttgttgcttgc
tttcaagctggaggttttgcgcagtgcaacctagcggagaaggctgtccctcttgaacaa
gtagcaaggcaggtgatggcgtggagcccgagaggagatttggcgtatgccgttgatcag
ttcagacaaggagagataccctttgatgatttgagacccggttatttcaatcacttggac
aaggttggacaaagcaacaaaagtatttccagcgcaccttacgaacctcttcaagctgca
ggcacattacgggatattgggacggatgaaatggctttcgagtacatggcatatcaatat
aaagtggaaggcgatgctcctgaaaatttatgcgattggaatcgtcaagttgcccaatat
tgcggacatgaagccgatgctggactctgggcattcctccaaaaccttatcgaagagttt
tctccctcatctgatggtcaaatcttcaacgaagccatattcacaaactctctccgcggc
ggaccatcaccgttgactccggatgcttctccaagaagaaaattgaataatttatcctta
aaggatactttgggcactcttccactttcaccagcgtcacccatcacgatcacgttggag
agaatcgaggaggccgatcagtcccaagaagcagtcgaagagatgctcagctcatctccc
tcttcctccagcgactcttcctccgctgtttcgagatcacactcgacaaacagattcatc
aacttcttgcctcccgaactctctcaatattcctccacatccgtcctgacctcctcacag
atcagggattccactcgtcccggctctttacttgcacaaatgaacaatcatcccaaagat
atatcaccaccctcagacgatgacacaccgagtccgaaacctcagccaatgagtatgagt
agaatcttgaatgattatccggatccttatggtattctccccgctgccccatccagagga
gctagttcgcaggctactccgactctacgttctgaaacgcaaaatctgagaagtgcccag
atgagaggtgtctccagaccatccttggtgacgtcttctcataaaggaggtagtcaggaa
aggaggaaagaggtgaggatggttcctatggcgaaagagaatgagaaagaggaagaccat
gtatgggacaagtaccgggaaaaaagatgtgctactttggtcgagtggtggttatctcat
gtggatcatggagacattcaactagccacgaccatcttcatcgttggctcgtgtgcggtc
gactttcctcgtcaacaatgtgaacgtctcgtccatgcgtatgtcgaccttctggaacga
tacaaacttttccttcccgcctcctacatccgccaatatgcgggttttgacactctccac
gtcacgcccttcgacgaggggatgactcatatcctcttctgtcaacgttgtcaaagacct
actggctcgcttgaagatatagatgtgaaagggaagaagttctggtggtgtaagagatgt
aagcttgcagcacaacattgtgcagtgtgtcacgaatcagtcaagggattacgattgggt
tgtaataagtgtcatcatggtggacatcaaagttgtatgaggcgatattatctcaaagct
gaatcacaacctcaacctaaagcacctccagtttccttcccacaactcggcacccaacgt
ttcactcctgacgaccaaccttccggttctcgtgtcacattgtctgtatctgtcaccacc
acggctactaccactactcgtagttctgagggtaaatctggatcaggggaaatcacaatg
actttatgtcctgctggttgtggatgcaaatgtaggattgtagtgcgacctcttgagccg
ggttga
DBGET
integrated database retrieval system
