Tremella mesenterica: TREMEDRAFT_42834
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Entry
TREMEDRAFT_42834 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K20224
importin-9
Organism
tms
Tremella mesenterica
Pathway
tms03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TREMEDRAFT_42834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_42834
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
TREMEDRAFT_42834
Pre-60S particles
TREMEDRAFT_42834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_IPO9_c
IBN_N
Xpo1
Cse1
Motif
Other DBs
NCBI-GeneID:
18493413
NCBI-ProteinID:
XP_007002561
JGI:
Treme1_42834
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MLNSSLDPIQRQSAGLLLQQYINVHWSDAADKFKPPLVPPEIKLQLRPSILHILSEPHRK
IRSAGAFAAAAIAKLDWPEEWPELVPSLSELLQSDNVDACQGAMSMLTEFLDEGMSEDQL
QPVIQSLAPPMLAILQKKEMHSPFTRAQTVDVFREIVATFHGSNNKRSDLQQAAMGFIGS
WTSAFEELLAADAATEVARDWDEILVRKQIIEAYSLLQTRKTTTDFPRHTHLVVSNLISL
IPAYQIYYVASSSSGREPPSTTSRAHSKDPASSLVELACAAFDFLEPAVRSPKVREALLE
GPRGGETPTMLMRALMESVETWLDDPNAFLIDDDESSGNYNARICGHDVIGSLIDKYPTP
VVHLLQEMCVSVIQDCSKKRQERDPDWWQRLEALFAMLCGISSDLRTQAEADINAGRSPK
LDYNAMFTLILPSALNYNDVPFLQARAFQFVSLFAQLLSEDLCRQYLVVAVSALQSPDHS
TTVKLAAVRAIRNFCRFVDVSFIRVHSRAMLDYLVGILPHATKETLYLTLETIEALLVLD
TELLTVETAFMIAKSLHDVWFTNYEDPVTTGSIEDLLDVLVDTSPPITRIVVMTLGPNLS
KAILTVDDKSNHLPCEAIQLANRLVRTRDGPLESELIDTVTWAIMNFLRVSEDSDAIQVN
HRFRLLIKMADEQYVDGIHYIYGLLDRFLAPTFPEDGAIAVGGLVMHLLRKAPGPIQPVL
LDILQALVNRLVTAQLPSLIQSLVLPFAYLFVEHTEEILELLSKLDARMPDGSTTLALPV
VLNQWCEMSDTISGSWNIRVSDLGLARLFMAPVPLLQQIQVKGDMIITQTNSKEYMTRSK
TKANPIQHTMIPFPVKVLKLLLHEVEDVGHEKRLSGLADVVEEDDGDADWSDDDPLGGSD
QGTQLAALQGLPDVSDEQDDDDDLKSDPISQIDLPVHLISVLRQAYTTNSNGIHQMIPLL
TPEEKSNLRRVLSA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattcctcccttgatcccatccagcgtcagtccgccggtctgttgcttcagcaa
tacataaatgttcattggtctgacgctgcggacaagttcaagcccccactggtgccccct
gagatcaaattacaacttcgaccttccatcctccacatactctccgaacctcaccggaag
atacgttcggcaggggcattcgcagcagccgcaatagccaagttggactggccagaagaa
tggccagagttggtgcccagcctgtccgagctgcttcaatctgacaatgtcgatgcttgc
caaggagccatgtccatgctcaccgagtttttggacgaaggcatgagtgaagatcaacta
cagccagtcatacagtccttggctcctcccatgcttgctatcttacaaaagaaagagatg
cactctcccttcacccgagcacaaactgtcgacgtcttccgggagattgttgcgacattc
catgggtcaaataacaagcgcagtgatctgcaacaggctgcaatgggattcatcggttca
tggacgagtgcatttgaggagttgcttgctgccgatgctgctaccgaggtcgcccgtgat
tgggatgagatacttgttcgcaagcagatcatcgaggcatattctctcttacaaactcgc
aaaactacgacggattttccacgccacactcaccttgttgtctcaaatttgatctctctg
atacctgcgtatcagatctactacgtcgcttcgtcatcatctggacgagaaccgccatca
acaacttcccgtgcccattccaaggaccccgcaagcagtcttgtcgaattggcatgtgcc
gcgttcgattttcttgaacctgccgttaggtcgccgaaggtcagggaagccttacttgag
ggaccacgcggaggagaaacaccgaccatgttgatgagagctttgatggagagcgttgaa
acatggcttgatgatcccaatgcgttcttgatcgacgacgatgaatcgtcaggcaattac
aatgctcggatatgtggtcacgatgtcatcggttctctgatagataagtacccaacacct
gtcgtgcacctgttgcaagagatgtgtgtgagtgtgatacaggattgttcaaagaagcga
caggaacgagatcctgattggtggcaacgtttagaagccctcttcgctatgctttgtggt
atctcgagtgaccttcgaacacaggcggaagcagacataaatgcaggtcgctccccgaaa
ttggattataacgcgatgttcaccctgatcttacccagtgctttaaattacaatgatgtg
ccatttttacaagcccgggcgtttcaattcgtctccttgttcgcccaactcctctccgag
gatctgtgtagacagtaccttgtcgtggctgtatcggctctgcagtctcctgatcattct
acgacagtcaagcttgccgctgtgcgagcgatacgaaacttttgtcggttcgttgatgtc
tccttcattcgcgttcactctcgggccatgctcgactatttagttggaatattacctcat
gcgactaaagagacgttgtacctcacattggagacgatcgaggcattgttggtcttggat
acagagcttttgacagtcgaaactgctttcatgatcgcgaaaagtttacacgatgtctgg
ttcacgaattacgaagatccagtaacgactggaagtatagaagacttattggacgttttg
gtagatacttccccacccattactcggatagtcgtcatgacccttggaccgaacctgtca
aaagctatcttgacagtggatgacaaatcgaatcatcttccttgtgaagcgatacaattg
gcaaatcgattagtacgaacaagagatggtccgttagaatctgagttgatcgatactgtc
acatgggccataatgaactttttgagagtttctgaagattcggatgctatacaagtcaat
catcgttttcgcctcttgatcaaaatggctgacgaacagtatgtcgatgggatacattac
atatatggtctacttgatcgatttctggctccgacattcccagaagatggtgctatagct
gtgggcggattagtgatgcacttacttcggaaagcacctggtccgatccaacccgtattg
ttagacatcttacaagctttagtgaatcgattagtcactgcgcaacttccctctctcatt
cagagtttggtattgccattcgcatatctctttgtagaacatacagaagagattttagaa
ttgttgtcgaaattggacgcacggatgccagatgggtcaacgacactagctctgccggtt
gtgttgaatcaatggtgcgagatgagcgatacgatcagtggatcgtggaatatccgcgtg
agcgatttaggtttggcaagattgttcatggcccctgtgcctttgttacaacagatccag
gtgaagggagatatgatcattactcagacgaatagcaaagagtatatgacacggtctaaa
acgaaggctaatccgatccaacatacgatgataccatttccagtcaaagttctcaaattg
ttattgcatgaagtggaagacgtaggacatgaaaaacgattgagcgggctagcagatgta
gtagaagaggatgatggggacgcggattggtcagacgacgatccgctcggtggatctgat
caaggaacacaactggcagctttacaaggattaccggatgtatcggacgaacaggatgat
gatgatgatttgaaatcggatcctatttcacaaattgatcttcccgtacacctcatcagc
gtcctccgtcaagcttacactaccaactccaacggtattcaccaaatgatccctctcttg
actccagaagaaaaatcaaatctccgtagagtcctaagcgcctaa
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