Tremella mesenterica: TREMEDRAFT_42914
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Entry
TREMEDRAFT_42914 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tms
Tremella mesenterica
Pathway
tms03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TREMEDRAFT_42914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tms03021
]
TREMEDRAFT_42914
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_42914
Transcription machinery [BR:
tms03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
TREMEDRAFT_42914
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
TREMEDRAFT_42914
PBAF complex
TREMEDRAFT_42914
GBAF(ncBAF) complex
TREMEDRAFT_42914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
18493425
NCBI-ProteinID:
XP_007002573
JGI:
Treme1_42914
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTPIPVPPTAGPSTQPSTNGIPPQTQGDAKKRVEPDPDQIRRTKQPRPPLPPPHILASL
VPESVAFNELLDVEAKLDWTLMRKRAEINDTLGRPVKVKRNIRVFISNTAHDQTWQAAQS
AQAVIDFDVSMNAAVESKDSGDGVENGDQPSGGTGNDVDLSTGKGIPGWVLRVEGRLLDS
GNVRIDKTKRKFSTFLRRVVVEFDNREPPTYPEGNVVEWSPANQPPTDGFEILRRGDSNV
NCRIILDIAHYPERYRITSPLSELIASKEGTRGEIISAVWKLIKIAGAQDKEDPTIVRPV
GGLEKLMMPGQDGVPFHDIPQLVTRFLAHPDPVVIPYTIRVDRDYQFHDKCFDIPVEMED
PLKSKMADLLKRIEGDEGKEIMELEDKVGELVYHARELKQKRDFLEAFATNPQAFIQNWL
QAQARDLDEMLGFQIGVASLNGGSVREEDLRRSDLFTMPWVDEAIVVHESARMEQERRQH
GKR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccctatccctgtacctcccactgctggaccatctacccaaccgtctactaat
ggaatccctcctcaaactcaaggggacgccaagaaacgtgtggagcccgacccggatcag
attcgtcgaacaaaacaacccagaccaccacttccccctcctcatatactcgcgtcttta
gtaccggaatcagtggcattcaatgagctcttagatgttgaagcgaaacttgattggact
ttgatgagaaaaagagcggagattaatgatacacttggtcgaccagtgaaggtcaaacgc
aatatcagagtgttcatctctaataccgcacacgaccaaacatggcaagccgcacaatca
gctcaagcagtcatagattttgatgtatctatgaacgcagctgtagagtcgaaggattct
ggggacggcgtggagaatggggatcaaccatccggtgggactgggaacgatgtggactta
tcaacgggaaaaggtattccgggttgggtattgagggtagaaggaagattgctcgattct
gggaatgtcagaatagacaagaccaagagaaaattctcaaccttcctgcgtagggtagta
gtcgagttcgataatcgcgaaccacccacttatccagagggaaatgtagtagagtggtct
cctgcaaaccagcctcctacagatggcttcgaaattcttcgtcggggagattcgaacgtc
aattgtcgtatcatcctcgacatcgctcattatcccgaacgataccgtatcacttctccg
cttagtgaactgatagcgagtaaagaggggactagaggggagatcatttctgctgtttgg
aaattgataaagattgctggtgcgcaagataaagaagatcctaccatcgtgagaccagtc
gggggtttagaaaagctgatgatgcccggacaagacggagtcccctttcatgacatccct
caacttgtcactcgtttcttagctcatccagatcccgtagtgataccctacaccatccgc
gttgaccgagattatcaatttcacgataaatgttttgatatcccggtggaaatggaagat
cctctcaagagcaagatggctgatttactcaaacggatcgaaggggatgaagggaaggag
attatggagttggaagataaagttggggaattggtctatcacgctagggaattgaaacag
aaacgtgacttcttagaagctttcgccacaaaccctcaagctttcatacaaaactggctt
caagctcaagctcgggatttagacgaaatgctgggtttccaaataggcgtagcatctctc
aacggcggaagcgtccgagaagaggatctgagaaggagcgacttgttcactatgccttgg
gtcgatgaagctatcgtagtgcatgaatcagcgaggatggaacaggaacgtcgtcaacat
gggaaacgatga
DBGET
integrated database retrieval system
