Tremella mesenterica: TREMEDRAFT_43131
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Entry
TREMEDRAFT_43131 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K00236
succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
Organism
tms
Tremella mesenterica
Pathway
tms00020
Citrate cycle (TCA cycle)
tms00190
Oxidative phosphorylation
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
tms01200
Carbon metabolism
Module
tms_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tms_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tms_M00148
Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TREMEDRAFT_43131
09102 Energy metabolism
00190 Oxidative phosphorylation
TREMEDRAFT_43131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sdh_cyt
Motif
Other DBs
NCBI-GeneID:
18493457
NCBI-ProteinID:
XP_007003336
JGI:
Treme1_43131
LinkDB
All DBs
Position
Unknown
AA seq
178 aa
AA seq
DB search
MSVTVSRTLLRTARAPQYVLRLSSPGLLLAQRRFASTQPVTPADEIAILNSQREKRPTSP
HLAIYQPQLTWIASGFNRLTGVALSGVLYGASLIYLLHPVFPAIDSAHLIQLAHDMPIWL
KGGVKLLFAIPFTFHTFNGMRHLGWDMGKGLTLKATYATGYTVLAATAVSSIYLAFFV
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcactgtctctcgaaccctgctcaggacagcgcgtgctccacaatatgtcctc
agactttcctcgcctggtctcttactagctcaacgcagattcgcatcaacacaacctgtc
accccggctgatgagattgctatactcaacagtcagagagaaaagagaccgaccagtcct
catttagcgatttaccaacctcaactcacgtggatcgcatcgggattcaacagactgaca
ggggtcgccctttctggagtgctctatggcgcttctttaatatacctcctccatccagtc
ttccccgctatcgactcggcgcatttgatccagttggcacatgatatgccaatctggctc
aagggaggagtcaaattgttatttgctataccttttactttccatacgttcaacgggatg
cgtcatctggggtgggatatgggcaaaggtctcacacttaaggcaacctatgctacaggc
tacacggtccttgctgccaccgctgtctctagcatctacctcgccttcttcgtctaa
DBGET
integrated database retrieval system