Tremella mesenterica: TREMEDRAFT_43154
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Entry
TREMEDRAFT_43154 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tms03032
]
TREMEDRAFT_43154
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_43154
Enzymes [BR:
tms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TREMEDRAFT_43154
DNA replication proteins [BR:
tms03032
]
Eukaryotic type
DNA Topoisomerases
TREMEDRAFT_43154
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
TREMEDRAFT_43154
Centrosome formation proteins
Centriole proteins
TREMEDRAFT_43154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
18493462
NCBI-ProteinID:
XP_007003341
JGI:
Treme1_43154
LinkDB
All DBs
Position
Unknown
AA seq
1344 aa
AA seq
DB search
MDVDEIDEGPTGAKRSASDMYQKLSQLEHVLKRPDSYIGSVEAITQMMWVLNAETKTMVF
RNTTFVPGFFKIFDEILVNAADNKINDATMDTIKIHIDREKNQISVHNNGRGIPIEMHKK
EGIMIPELIFGHLLTSSNYDDDQKKLTGGRNGYGAKLANIYSLEFIVETADKTNGKKYKQ
VFSHNMGKKSPPKITDNKKGEEYTRITFTPDLKRFGMNGIDDDTYALLTKRVYDVAGTVK
DIKVYLNDERLKIKGFKQYVEMYLNASTQAISDAAGGAAVPKPTIIYESPNKRWEVAFAL
SDGEYRHVSFANSISTIKGGTHVDMISTQLANKLMDQIKKKNKAAPVKAFQIKNHMWIFV
NALVENPAFDSQTKETLTLKSSAFGSRCELSEDFVKKAVSKSGIIDNVLNWAKFKQDQIL
KKSDGAKRSRISGIVKLEDANNAGGRNASRCTLILTEGDSAKALAVSGLGVVGRDDYGVF
PLRGKLLNVREAGHDQIVKNVEIQHIKQILGLKHNQDYLSTDSLRYGHVMIMTDQDHDGS
HIKGLIINFLDHFYPSLLRIPDFLVEFITPIVKVTKGKQEMSFYTMPQYEEWKAAHNDGR
GWDAKYYKGLGTSTSADAKKYFSALERHRLAFETMKNEDRALIDMAFNKKKADDRKEWLR
QFKPGTFLDHDVHTVPISDFVNKELILFSMADNIRSIPSVADGLKPGQRKVLFGCFKRNL
TKEIKVAQLAGYVSEKTAYHHGEQSLTSTIVGLAQNFVGSNNINLLAPNGQFGTRIAGGK
DAASARYIYTEIPRMTRAIFHSADDGLLDYMLEDGMGIEPDYYLPVVPLVLINGADGIGT
GWSTSIPNYNPVDIVNNLRKMMRGEEPERMNPWFRGFRGSIERVEQDKYKVSGIIEKVNN
NTLEITELPIRKWTQDFKEMLEEMTTGTDKVPSTVKDYEEHHTDTTVHFRLHLADNHMRA
AEEEGFEKRFKMSTTISTSNMVCFDMNGKIKKYSSAEEILSDFFHKRLEFYALRKQHLAD
ELNRQFEKLSNQARFVQMIISKELSVSNKKKAVLVAELRTLNFKPFPKGKKKDEGEVEPN
LEEEDEGQASDYDYLLGMAIWSLTAEKVEKLLAERDGKEQELIELLKLSAQNLWDRDLDK
FLSEWESLLLDDVSAAKTNKPKTKAALKVAEKKKRRANGEDSDESDSFMPTKAKPKPKPK
AKASPVKVSPLKRESAHLSAGDEPPAKKAPSSKPAVKTKPKPKIIHDEDSDDEIYNIPAP
KASSSKAKIPLDDEDESDIEVMSPPKAVKSKPAPRATTKSKKADSDFDEDDSDDFVPAPR
AAPRTGRGATKKTAYVEMSDDEDD
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgacgagatagatgagggtcctacgggggccaagagaagtgcgtcggatatg
tatcagaagctgtctcagctggaacacgtcctcaagaggccggactcttacatcggctct
gtagaggctatcacacagatgatgtgggttctcaatgcagagacaaaaactatggtattt
cggaatacaacatttgtgcctggattcttcaagatcttcgacgagatccttgtgaatgcg
gccgacaacaagatcaatgacgctacgatggacaccatcaagatccacatagaccgtgaa
aagaatcagattagtgtacataataatggtcggggtatacctattgaaatgcacaagaag
gagggcatcatgatcccggagttgatatttggtcatcttcttacgtcgagcaactacgat
gatgaccagaaaaagcttaccggtggacgtaatgggtatggtgccaaactggcaaacatt
tactcgctcgagttcatcgtagaaacggcggataaaacgaatggaaagaaatacaaacag
gttttcagtcacaacatgggcaagaaatctccgccaaagatcaccgacaacaagaagggc
gaagagtatactcgaatcacgtttacccctgacctgaagcggttcggcatgaacggtatt
gatgatgatacctacgctctcctgacaaagcgagtgtacgatgtggcagggaccgtcaaa
gatattaaagtttatctcaacgacgaacggctgaagataaaagggtttaagcagtacgtg
gaaatgtatctgaacgcgtccacgcaggccatatctgacgctgctggtggcgcagcggta
ccaaagcccaccatcatatatgaatctccaaacaagagatgggaggtggccttcgccctc
tcagacggggaatatcgacatgtctccttcgccaattcaatttcgaccatcaaaggtggc
acgcacgttgacatgatctcaactcaactcgccaacaagcttatggatcaaataaagaag
aaaaataaagctgctccggtcaaggcctttcaaataaaaaatcatatgtggatcttcgta
aacgccttggttgaaaaccccgccttcgactcccagacaaaggagactctcacgctcaaa
agttccgctttcggtagtcgctgcgagctgtccgaagactttgtgaaaaaagcagtctca
aagtccggtatcattgacaacgtcctcaactgggccaagttcaagcaagatcagatattg
aagaagtccgacggcgcaaaacgctcccgtatttcgggcattgtcaagttggaagatgcc
aacaatgcgggaggccgcaacgccagtcggtgcaccttgattctcaccgaaggagattcc
gccaaagctctcgccgtttccggtcttggtgtcgtcggtcgcgatgactatggggtgttc
ccgcttcgaggtaaacttctcaacgttcgcgaagcaggtcatgatcaaatcgtgaaaaat
gttgagatacaacatatcaagcagattctcggtctgaaacacaatcaagattatctttct
accgacagtctgagatacggacatgtcatgatcatgacagatcaagatcatgatggctcg
cacatcaaaggacttatcatcaacttcctggatcacttctacccgtctttgcttcgcatc
cccgattttcttgtcgaattcatcactcccatcgtcaaggtgaccaaaggcaaacaggag
atgagtttctatactatgccacaatatgaagaatggaaagcagcacacaatgacgggcgc
gggtgggacgccaaatattacaaaggtctcggtaccagcacctcggccgacgcgaaaaaa
tacttttcggctctggaaagacatcgactagccttcgagacgatgaaaaacgaagaccga
gctctcattgatatggcattcaataagaagaaagcggatgatcggaaggaatggctcagg
cagttcaaaccgggcactttcctagatcatgatgtccacactgtcccaatctcagacttt
gtcaacaaggaactcatcctcttttcaatggcggacaacatccgatcgatcccctcggtg
gccgatggtctcaagcccggacagcgcaaagtcctctttggctgcttcaaacgaaatctg
acaaaagagatcaaggtggctcagttagcaggatacgtctctgagaagactgcgtatcac
cacggggagcaatcgttgacctccacaatcgtcgggctcgctcaaaacttcgtgggaagt
aacaatatcaatttgcttgcacccaacggtcaattcgggacccgtatcgctggcggtaag
gatgctgccagcgctcgttacatctacacggaaattcctcgaatgacccgagcaatcttt
cactccgccgacgacggtctcttggactatatgctcgaggatggtatgggtatcgaacct
gattactacctgcccgtagtcccgttggttcttatcaatggtgctgacggtattgggacc
ggttggtctacgtccattccaaattacaatcctgtcgatatcgtcaataacttgcgtaaa
atgatgcgaggtgaagaaccggaacgtatgaatccctggttccgaggattcaggggcagc
atcgaacgagtggagcaagataagtacaaagtcagcgggattatcgaaaaagtaaacaac
aacacgctggagattacagagcttccgatacgcaaatggacgcaagacttcaaggagatg
ttagaagagatgactacgggcacggacaaggtgcctagcacagtgaaggattatgaggag
catcataccgacaccaccgtccacttccgtttgcatctcgctgataatcatatgagagca
gccgaggaggagggtttcgagaagagatttaagatgtcgaccaccatcagtacgagcaac
atggtatgctttgacatgaacggcaagattaaaaaatactcctctgccgaagagatattg
tcagacttcttccataagcgcctcgaattctacgcgctccgtaagcaacatcttgccgac
gagctcaatagacaattcgagaaactctccaatcaagcgcgtttcgtacagatgatcatc
agcaaggagttgtcagtctcgaacaagaagaaggcggttctcgtagccgaattgcgtacc
ctcaacttcaaacccttccccaagggcaagaagaaggacgagggtgaagttgaacccaat
ctggaagaggaagatgaggggcaagctagcgattatgattatctgctcggcatggcgatc
tggagcttgacggcagaaaaggtggagaagctcctggctgagagagacggcaaggaacag
gagctgatcgaattgttaaagttgtcggctcagaatctatgggaccgagatttggacaaa
tttctgtccgagtgggaaagcttgctcttggacgatgtctcagctgcgaagaccaacaag
cccaagacgaaagctgctctcaaagtggcggagaagaagaaacggagggccaacggggag
gactcggatgaatctgattcgttcatgccgaccaaggctaagcccaagccaaagccaaaa
gcgaaagcctcgccagtcaaggtctcgcctttgaagagagagagtgcacacttatctgct
ggtgatgaaccgcctgccaagaaggccccttcctcaaagccagcggtcaaaaccaagccc
aagcctaagatcatccacgacgaggattctgatgatgaaatatataacatacctgctccc
aaggcctcgagttcgaaagcaaagatccccctggacgacgaggatgagtctgacattgag
gtgatgtcgcctccgaaggcggtcaaaagcaagcccgctcccagagctacgaccaaaagt
aagaaggccgactcggactttgatgaggacgactcggatgactttgtaccggcacctagg
gcggcaccgaggacaggcagaggggcgacgaagaagacagcctacgtggagatgtctgac
gacgaggacgattag
DBGET
integrated database retrieval system
