Tremella mesenterica: TREMEDRAFT_43444
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Entry
TREMEDRAFT_43444 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
tms
Tremella mesenterica
Pathway
tms03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TREMEDRAFT_43444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_43444
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tms03037
]
TREMEDRAFT_43444
Enzymes [BR:
tms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TREMEDRAFT_43444
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
TREMEDRAFT_43444
Chromatin remodeling factors
SRCAP complex
TREMEDRAFT_43444
INO80 complex
TREMEDRAFT_43444
INO80 complex (yeast)
TREMEDRAFT_43444
SWR1 complex
TREMEDRAFT_43444
ASTRA complex
TREMEDRAFT_43444
Cilium and associated proteins [BR:
tms03037
]
Motile cilia and associated proteins
Dynein assembly factors
TREMEDRAFT_43444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
Mg_chelatase
AAA_28
AAA_18
IstB_IS21
bpMoxR
AAA_25
AAA_7
Cdc6_lid
ATPase
nSTAND3
AAA_33
ResIII
Rad17
RNA_helicase
NPHP3_N
ABC_tran
NACHT
AAA_24
AAA_11
PhoH
Motif
Other DBs
NCBI-GeneID:
18493500
NCBI-ProteinID:
XP_007003379
JGI:
Treme1_43444
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSAPGPSTIITQPPPPSTLRESRIATHSHIKGLGLADDGTAMESSQGFVGQRVAREALGL
HLALLKTGKYSGRSLLLVGPPGTGKTALALALSQELGTKVPFCAMVGSEVYSGEVKKTEV
LASCFRRAIGLRIKETKEVYEGEVTELTPSEAENPLSGYGKTISHVIVGLKTVKGTKQLR
LDPSVYEAIQKERVVIGDVIYIEANTGAVKRVGRSDAYASEYDLEAEEYVPLPKGDVHKR
KELVQDVTLHDLDMANARPQGGQDIMSVMGQLIKGGRTEITDKLRREINKVVDRYIEQGV
AELIPGVLFIDEVHMLDMECFTYLNRALESPLSPYVVLASNRGLTTIRGTEDIISPHGIP
VDLLDRCMIVKTVSYNREEIRRVLEIRIRVENLSVKPEALDKLADEGEKSSLRYALQLLT
PASILAKTMGRTEVGLEDVGELGELFLDTKRSAGVLKGLEA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaccaggtccaagtacaatcataactcaacctccaccaccttccactctccgt
gaaagtcgtatagcgactcattcccatatcaagggtttaggtctggccgacgatgggaca
gcaatggaatcttctcaaggtttcgtcggtcaacgcgtcgctcgagaagctttaggatta
catttggctttattgaaaactgggaaatattcgggtagatcgttgttattggtcggtcct
cctggtacgggaaagacggctttggctttggctttgtcgcaagagctggggactaaagta
cctttttgtgccatggtagggagtgaggtttattctggagaggttaaaaagaccgaagtt
ttggctagttgtttcaggagagctattggtcttcgaatcaaagaaacaaaagaagtatac
gaaggagaagtcaccgaactcacaccttccgaagctgaaaatcctttatcaggttatggt
aaaaccatttcccatgtaatcgtcggacttaaaaccgttaagggaacaaaacaacttcga
cttgatccatcagtttacgaagcgattcaaaaagaacgtgtggtaattggtgatgtcatt
tatatcgaagccaatacaggagctgttaaacgtgttggacgttcggacgcttatgcgagt
gaatatgatcttgaagcggaagaatatgttccattaccaaaaggagatgtacataaacgt
aaagaattagtacaagatgttactttacatgatttggatatggcgaacgctagacctcaa
ggtggacaagatataatgagtgtgatgggacaattgataaaaggtggtagaactgaaatt
acggataagttgagaagggagattaataaagttgtggataggtatattgaacaaggagtt
gcggaattgatacctggtgttttgtttattgatgaggtccacatgctagatatggaatgt
ttcacctatctcaaccgagcattagaatcaccattatcaccttacgtagtcctcgcttcc
aacagaggtctcacaactatacgagggacagaagatataatatctccacatggaatccca
gtcgatcttttagatagatgtatgatcgtcaaaacggtctcatacaatcgtgaagagatc
cgacgtgttttggagattcggattcgtgtggaaaatttatcagtcaaacctgaagcttta
gataaattggcggatgaaggagagaaaagtagtttaagatacgctttacaattactcaca
cctgccagtatattagcaaagacgatgggtaggacagaagttgggttggaggatgtaggt
gaattaggtgaattgtttttagatactaaacgtagtgctggggttttgaaagggttggag
gcttag
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integrated database retrieval system
