Tremella mesenterica: TREMEDRAFT_44001
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Entry
TREMEDRAFT_44001 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K07374
tubulin alpha
Organism
tms
Tremella mesenterica
Pathway
tms04145
Phagosome
tms04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
TREMEDRAFT_44001
09142 Cell motility
04814 Motor proteins
TREMEDRAFT_44001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_44001
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_44001
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tms04812
]
TREMEDRAFT_44001
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_44001
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TREMEDRAFT_44001
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
TREMEDRAFT_44001
Cytoskeleton proteins [BR:
tms04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
TREMEDRAFT_44001
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TREMEDRAFT_44001
Exosomal proteins of other body fluids (saliva and urine)
TREMEDRAFT_44001
Exosomal proteins of colorectal cancer cells
TREMEDRAFT_44001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
18493570
NCBI-ProteinID:
XP_007004524
JGI:
Treme1_44001
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MREVISIHVGQAGVQIGNACWELYTIEHGLSPDGRLTEGSTSDDGFATFFSETGAGKHVP
RSLYVDLEPNVIDEVRTGTYRSLFHPETMITGKEDAANNYARGHYTIGKELVDTVLEQVR
RLADNCSGLQGFFVFHSFGGGTGSGFGALLMERLSTDYGKKSKLEFSVYPAPKLSTSVVE
PYNSVLTTHTTLEHSDCSFMVDNEAIYDICRRNLNISSPSFTNLNRLIAQVVSSITASLR
FDGSLNVDLNEFQTNLVPFPRIHFPLATYAPIISAEKAFHESNTVSEMTLSCFESNNQLV
KCDPRQGKYMACCLLYRGDIAPKDTNAAVANVKTKRTIQFVDWCPTGFKLGICNEPPALV
PGGDLAKVSRSLCMLSNTTAIATAWARLDNKFDLLYSKRAFVHWYVGEGMEEGEFSEARE
DLAALEKDYEEVGMDSVDPDEEDGEY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaagtcatctcaatccacgtcggtcaagctggtgttcagattggaaacgcttgc
tgggagctgtacaccattgaacatggtctcagccctgatggtcgattgacggaagggtcc
accagcgatgacggttttgcgactttcttctctgagacaggcgcaggtaaacacgttcct
cgttccctttatgtcgacttggaacccaatgtcatcgatgaagtcaggaccggtacttac
cgtagtcttttccaccccgagaccatgatcactggcaaagaagatgccgccaataattac
gcgcgaggccattacactatcggcaaagaattggtggacacggtactcgaacaggtccga
cgtttggccgacaactgttctggactccaaggattcttcgtgttccactccttcggtggt
ggtaccggttctggattcggcgcgcttctcatggaacgtctatcaactgactacggtaaa
aagtccaagctcgaattttcggtctacccagcccccaagctgtcaacttcggtagtggag
ccttacaactcggtacttacaacccacaccactctcgagcactcggactgttcgttcatg
gtcgacaacgaggctatctatgacatctgccgccgaaacctcaacatctcgtcaccgtcg
ttcacaaacctcaatcgcctgatcgcccaagtcgtatcctcgatcacagcctctcttcgt
ttcgacggatctctgaatgtcgatttgaacgagttccaaaccaacttggttccattccca
aggatccacttcccattggcaacttacgctccaatcatctcggctgaaaaagccttccat
gagtcaaacactgtctcagagatgacgctttcttgcttcgagtccaacaaccagttggtc
aagtgtgatcctcgacagggaaaatacatggcttgttgtctgttgtacagaggcgacatt
gctcccaaagacacaaacgccgccgttgccaacgtcaaaaccaagcgtacaattcaattt
gttgattggtgtcctaccggattcaagctgggtatctgcaatgagccacccgccctcgtg
ccgggaggtgacctcgccaaggtgtcacgatctctttgtatgctctcgaacaccaccgcg
atcgcaactgcctgggcacgactcgataacaaattcgatctcttgtattcgaagcgggcc
tttgttcattggtatgtgggtgaaggtatggaagagggagagttttcggaagcgagagag
gatctggctgctctggaaaaggattacgaggaggttggaatggactctgtggatcccgac
gaggaggatggggaatactga
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