Tremella mesenterica: TREMEDRAFT_44048
Help
Entry
TREMEDRAFT_44048 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
tms
Tremella mesenterica
Pathway
tms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TREMEDRAFT_44048
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tms01007
]
TREMEDRAFT_44048
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_44048
Enzymes [BR:
tms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
TREMEDRAFT_44048
Amino acid related enzymes [BR:
tms01007
]
Aminoacyl-tRNA synthetase
Class I (G)
TREMEDRAFT_44048
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TREMEDRAFT_44048
Prokaryotic type
TREMEDRAFT_44048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DALR_2
Motif
Other DBs
NCBI-GeneID:
18493575
NCBI-ProteinID:
XP_007004529
JGI:
Treme1_44048
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MTTIDVPKATSFPQPEWKPPQVTIQEPVLRVYNSLTRTKDIFTPTKGRRVDWYNCGPTVY
DSSHMGHARNYLTQDIIRRILRDYFGYDVNFVMNITDIDDKIIIRARETHLLNQTISQNP
SLTSQLIADTQASFAAYLDSKLMKILPTSSEVGPNATPFETFENIVKRDTSDLQWAAEMR
SKEEKFGMYMTSLTKAQAAIQKAEVRLAQSSGGGDAVKDLVEGTSDVLGPYLGTKLASTI
QDPIIICRQLASFWEDKFFSDMSRLHVLPPDTITRVSEYMPEIVDFVQGIVDNGFAYEGG
GSVWFDVTKFEGADGDGFRHEYAKLQPGSKGNRKLLDEGEGALTGVQGKRQAADFALWKA
KSKPGEPAWPSPWGEGRPGWHIECSVMASAILGEGMDIHSGGVDLMFPHHDNEMAQSEAY
HGCRQWVNYFLHTGHLHIEGLKMSKSLKNFITIDEALRDYSARQLRLAFMLQTWNARLDF
RKDLIADVRVKEETFNNFFINVKARIAEAAARRVVFDGKHHFDQLEKGLMSDFHSAQHDF
RIALCDSFNTPSAILVLLDLVAKVNVYFVSRGREYNIEPVRVIAEWVTKMLRMFGLGEGL
AGDGQIGWGKEGEEGSAGDFETKLDKYLRAITSFRDDVRRLAISSATPNEILNLCDKFRD
TDLINLGVQLDDGQSSTGGALYKLVDPSILIKAREEKQAILIEKARKKAETLALAENKKM
VLLEKGKVKPEEMFKPPNVPLDTWSEWDEQGLPIKDGKGEMVSKGQSKKNLKLWNEQVKL
NENWKKWKVEQGD
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatcgatgttcctaaagcgacatcattccctcagcctgaatggaaacctcca
caggtgactatacaagagccggtgctgagggtatataactctcttacgagaaccaaagac
atcttcactcccaccaaaggtcgcagagtagattggtacaactgcggtcctacggtatac
gactcatcgcatatgggtcatgctcgtaattacctcacacaggatattatccgtcgtatt
ctcagagattatttcggatacgatgtcaactttgttatgaacatcactgatatcgatgac
aaaatcatcattcgcgctagagaaactcaccttttgaaccaaaccatctcccagaaccct
tccctcacatctcaactcatagccgacacgcaagcttcttttgcggcttatctcgatagt
aaactaatgaaaatcttaccgacatcttcggaggtaggaccaaatgcaacaccttttgag
accttcgagaacatcgtcaaacgagatacgagtgacttacaatgggctgccgagatgaga
agtaaagaagagaaattcggaatgtatatgactagcttgaccaaggcccaagctgcgata
cagaaggccgaggtacgattagcgcagagctcaggagggggtgatgctgttaaagatctg
gtagaggggacttctgatgttttgggaccatatctggggacaaaactcgccagtacgatt
caagatcctatcatcatctgtcgccaattagcttcattctgggaagacaaattcttctcc
gatatgtcccgtctccatgtccttccgccagataccatcacacgcgtgtctgaatacatg
ccagagatcgtcgatttcgttcagggaatcgtggacaatgggttcgcatatgaaggcgga
gggagtgtatggtttgacgttactaaatttgagggtgcggatggagatgggttcagacat
gagtatgcaaaattgcaaccgggtagtaagggtaatcggaagttgttggatgaaggtgaa
ggcgcgttaaccggtgttcaggggaaaagacaagcagcagatttcgctctatggaaagca
aagagtaaacctggggaacctgcttggccttcaccatggggggaaggacggccaggatgg
catatagaatgttcggtcatggcttctgcgattctaggagagggtatggacattcattct
ggaggggtggatctcatgtttcctcatcatgataacgaaatggctcaatccgaggcgtat
catggctgcagacaatgggtcaactactttctgcatacgggacatttacatattgaggga
ttgaagatgagcaagtcattgaagaattttatcactattgatgaagctcttcgagattac
tcagcccgccaactccgtttagctttcatgctccaaacatggaacgcccgacttgatttc
cggaaagacctgatcgcggacgtacgagtcaaagaggagacctttaataacttcttcatc
aatgtgaaagcacgtatagcggaagcggccgcgaggagagttgtctttgacggaaaacat
cacttcgaccaattagagaaaggacttatgtcggacttccactctgcccaacatgacttt
cgtattgccctctgtgactctttcaacaccccctctgccatcctcgtcttgttagatctc
gtggctaaagtcaatgtgtactttgtcagtagaggtagagaatacaatattgagcctgta
agggtgatagccgaatgggtgacgaagatgttgagaatgtttggattgggtgaagggttg
gctggggatggacagattgggtggggtaaagagggtgaagaggggtcagctggggatttc
gaaactaaacttgataaatatcttcgagccataacttccttccgtgatgatgtccgtcgt
cttgccatctcctccgctactccaaatgaaatcttaaacctttgcgataaattccgtgat
acagacttgataaacctcggtgttcaattagatgacggacaatcatcaacaggaggagct
ttatacaaacttgtagatccatcgattctcatcaaagcaagagaagaaaaacaagctatc
ttaattgaaaaagcacgtaaaaaagcggaaactttagctttggcagaaaataagaaaatg
gttttgttggaaaaaggtaaagtcaaaccggaagaaatgttcaaacctccaaatgtacct
ctagatacatggagcgaatgggatgaacaaggtttaccgataaaagatggcaaaggtgag
atggtgagtaaaggtcaaagtaagaagaatttgaagttgtggaatgaacaagtgaagttg
aatgagaattggaagaaatggaaggttgaacaaggggattga
DBGET
integrated database retrieval system
