KEGG   Tremella mesenterica: TREMEDRAFT_45435
Entry
TREMEDRAFT_45435  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
tms  Tremella mesenterica
Pathway
tms03030  DNA replication
tms03410  Base excision repair
tms03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TREMEDRAFT_45435
   03410 Base excision repair
    TREMEDRAFT_45435
   03420 Nucleotide excision repair
    TREMEDRAFT_45435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tms03032]
    TREMEDRAFT_45435
   03400 DNA repair and recombination proteins [BR:tms03400]
    TREMEDRAFT_45435
Enzymes [BR:tms01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TREMEDRAFT_45435
DNA replication proteins [BR:tms03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    TREMEDRAFT_45435
DNA repair and recombination proteins [BR:tms03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      TREMEDRAFT_45435
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
Other DBs
NCBI-GeneID: 18493749
NCBI-ProteinID: XP_007007035
JGI: Treme1_45435
LinkDB
Position
Unknown
AA seq 540 aa
MVNRLRAAVVKVFSAKHSLTLPTAALNYIEQVLQENDVPEEEWSTGLELWAREYLKGEES
SSLVSLPALKKAYEILQLGVNDNDDMLDPSEVNIETHFSVVDAFDMPAVHFDAVRGGFTT
SKHTPSLAGQASSRAAFLRERWGIIKEIILRNENFTPPAIAGHDRDNYLKLTSTRNLLGR
VGQLFLLFGMLSRDPEGRLCLEDGEGRVRLDMDDAVPGEGMFTEGCMVLIEGEYTIDETI
RVLAMGHPPSEKREVARSLHGHVDFIGGGAISLKEEQKFLPTVAVNTQVSFVVLSDVWLD
HPRCLPALRKMFEGYAESVEFRPMAFVLCGNFSQKGWETEEGLKRYSNGFNALTDLLVSF
PLLQSSHFIFVPGPLDPWSSSTLPRPALPSLLSARLKQRLPNVHFVSNPCRIRYFGMELV
ICREDLMGRMVRNLVGVKDVKGADMKRYLVQTILDQTHLSPLPLSVRPTLWEFDHALRLY
PMPSALVLADKYERYELTYEGCHVFNPGRFVGGGGEGGEFEWSMYYPATGRSERSALTLD
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggtcaacagactaagggcggcagtggtcaaggtcttctccgcaaagcactcattgacg
ttacctaccgcggcgcttaattacatcgagcaggttttgcaagagaatgatgtcccggaa
gaagaatggtctactggattggaactttgggcgcgagagtatctcaagggagaagaatcg
tcttcccttgtttccctcccagcgctgaagaaagcatacgagattcttcagctgggagtc
aatgacaatgatgacatgctcgatccatcggaagtcaacattgaaacgcacttttcagtg
gtagacgctttcgacatgcctgctgtacactttgatgctgtcagagggggtttcaccaca
tccaagcatacaccttcccttgctggacaagcttcaagtcgagctgcattcctcagggaa
aggtggggcataatcaaagagatcatcctgagaaatgaaaacttcactcctccagctata
gcgggtcatgatcgagacaactatttaaagctcacatctactcgcaacctgctgggaaga
gtcggacagctctttctcctctttgggatgctttcccgagatccagaaggcagactctgt
ctcgaagacggagagggcagagtcagattggatatggatgacgctgtaccaggagagggg
atgtttaccgaaggatgtatggtgctcatcgagggtgaatacaccattgacgaaactatc
cgtgtactggccatgggccatcctccaagtgagaaaagagaagtagctagaagcctacat
ggccatgtcgacttcattggcggaggagctatttctttgaaagaagagcagaagtttcta
cccacggtggcggtcaacacacaagtttcattcgtcgttctgtcagatgtctggctcgat
caccctcgatgtcttccggctttaaggaaaatgttcgaaggttatgccgaatccgtggag
ttcaggccaatggcttttgtactttgcggaaactttagtcaaaagggatgggaaacggag
gagggattgaagaggtatagcaatgggttcaatgcactcacagatctcttggtttctttc
cctctcctccaatcatctcatttcatattcgtacccggacccctagatccttggtcctcc
agcactctccctcgacctgctctcccttctctcctatcagcacgactcaaacaacgcctg
ccaaatgtacacttcgtctcgaatccgtgtcggatccgatactttggaatggaactcgtc
atctgtcgagaggatctaatgggtcggatggtcagaaatttggtgggggtcaaagatgtc
aaaggcgccgatatgaaacgatatttggtgcagactattctcgatcaaacccatctatct
cctcttcccctgtctgtccgaccaacattatgggagtttgatcacgctctacgactatat
cccatgccttcggctttggttctggcggacaaatatgaacggtatgagctcacctacgaa
ggttgccacgtgtttaatcctggccgatttgtgggtggtggtggtgaagggggggaattt
gagtggagcatgtattatcccgcgacggggaggagcgagcgaagcgcattgacattagac
tag

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