Tremella mesenterica: TREMEDRAFT_45638
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Entry
TREMEDRAFT_45638 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K06063
SNW domain-containing protein 1
Organism
tms
Tremella mesenterica
Pathway
tms03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TREMEDRAFT_45638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_45638
Spliceosome [BR:
tms03041
]
Complex B
Other components
Prp19-related factors
TREMEDRAFT_45638
Complex C
TREMEDRAFT_45638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
18493772
NCBI-ProteinID:
XP_007007523
JGI:
Treme1_45638
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MAALARALPLPLYNPVEEYEDVAPLSIPQGPSIPKYGKRKGWKPRQQHDFNGGGAYPECH
IAQYPLDMGKKKAGAGSTLALQVDADGMVRYDAIAQQGRAPGSKVQSSFKDLVPLANRHD
ISDKERAMERPDETAVQETAERTRLALERLTSAKIKAAQPKHVAKANTDSSYIRYTPANQ
SADEGKQRIIKMSSVQEDPLEPPKFKHKKIPKAPDEPPVPVLQSPPRPATAQDQKDWMIP
PCISNWKNNKGYTIPLDKRLAADGRGLQDVHINDNFAKFSEALYVADRHAREEVRARAQM
QQLLAQKEKAQKEENLRLLAQRAREERSGITPSVTAASSTRGPPKELGVGLAAYGSDSEE
ESEQEEDVSEDEEDDEQVEEREKVRQEKRKEREKQMRMNNMGSETRAKMIAREQNRDISE
KIALGLAKPTASKETLLDSRLFNRESLSTGFAGDESISIYDRPLFNGSSAAAAIYSARGN
AGRDDEAYGGGTEEGIREELGKDRFALGNATRGFDGADSAVVREGPVQFEKDVVVALDGT
SDPFGVEQFMDAARKGGKRTAEHDREEARKKQRED
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctcgcaagggctctacctctccccctttacaatcctgtagaggaatacgaa
gatgtcgcgccattgtccatcccccaagggccatccatacctaaatatggcaagcgaaag
ggttggaaacctagacagcaacacgacttcaacggtggtggtgcatatccagagtgtcac
atcgctcaataccctttggatatgggcaagaagaaggctggtgccggatcgacgctagct
ctgcaggttgatgcggacgggatggttaggtacgacgcgatcgctcagcagggtagagcc
ccgggtagtaaggtgcagtcgagcttcaaagacctcgtgcctctcgccaatcgacatgat
atctctgacaaggaacgggcgatggagcgaccggacgagaccgcagtccaagagaccgcc
gaacggacacgtcttgctctggagcgactgaccagtgcaaagatcaaagctgctcagccg
aaacatgtcgccaaggcaaacaccgactcgtcttatattcgctacacaccagccaaccag
agtgcggacgagggaaaacagagaataatcaaaatgtcgagcgtccaggaagatcctctc
gaacctccaaagttcaaacataaaaagattcccaaagcccctgatgaaccccctgttccc
gttctgcaatccccacctcgacccgctacggctcaggaccaaaaagactggatgatacct
ccttgcatatccaattggaaaaacaacaaaggttacactattcccctcgacaagcgtctg
gcagcggatgggcgagggttacaggacgtgcatatcaatgacaactttgccaaattctct
gaagctctgtacgtcgccgaccgacatgctagggaagaggtacgggcgagggcgcaaatg
caacagctattggcgcagaaggagaaggcacaaaaagaggagaacttgcgactactggct
caaagggcaagagaggagcgtagtggaatcacaccttctgtcaccgctgcgtccagtacg
cgaggaccgcccaaggagcttggcgtgggtttggccgcgtacggcagcgacagtgaggaa
gagagtgaacaggaagaggatgtcagtgaggacgaggaggacgatgagcaggtcgaggaa
cgtgagaaagtgcgacaggagaagaggaaagagcgagagaaacagatgaggatgaataat
atgggttcggagactcgcgccaagatgatcgctcgagaacaaaaccgagatatttccgag
aagattgcccttggtcttgccaaaccgacagcgtctaaggaaactttactcgactctaga
ttattcaaccgagaatcactcagcactggcttcgctggcgacgagtcgatcagtatctac
gaccgtcctctcttcaacgggtcttcagctgccgcggccatctactctgctcgtgggaac
gctggacgggatgatgaagcatatggtggtgggactgaagagggtatcagggaagaattg
ggcaaagacaggtttgcattgggtaacgccacccgtggattcgacggcgccgacagtgca
gtggtacgtgagggtccagtgcagtttgagaaggatgttgtggtcgctcttgatgggacg
tccgatcccttcggcgtagaacagtttatggacgccgcgaggaaaggtgggaaacggact
gctgaacatgatagggaagaggcgaggaagaaacaaagggaagattag
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