Tremella mesenterica: TREMEDRAFT_45770
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Entry
TREMEDRAFT_45770 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
tms
Tremella mesenterica
Pathway
tms03440
Homologous recombination
tms03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TREMEDRAFT_45770
03460 Fanconi anemia pathway
TREMEDRAFT_45770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_45770
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
TREMEDRAFT_45770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
HHH_8
Motif
Other DBs
NCBI-GeneID:
18493792
NCBI-ProteinID:
XP_007007732
JGI:
Treme1_45770
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MPPKIQCGNPLFLSWMQGQLRGCKSLASCPITYPRPRDLVCLRGIGPKIVSVLEKRWKVH
CEENGLALPGTPQRKTGKNRAPTPPSDISIDESVPTPSQDPQPSKKARKPVKPKVYVPQP
GSGGYGILLALILAIDDPRRSTQVFLTKGEVMNAAQEYCDSSYERSDKGTHFTAWSSMKT
LVNKGYVYVTGNPHKYCLTEEGYEVALAVRNLRPEFSHMEKHPFLHSPARVGSSSKAPTS
HKPLDSATASGPSIVHKEKIVPRKSSEKFEFWYIDAFESRVHDMSEALLRLDPDEFVNIR
KIEFRFHQRDHPFTAQLRIVDTTARVRHGTEATLYGYIIEDTAPPRCSTFSLSGDAPMTK
DISPPRLSNTAVTLNDDSAGISDDEDFLPIMDKSTVIDRPTSSVTTVPKSSSLLAAEATV
HRNTITGQSQTTASLKSTRSTQVYRPAPRLSSHMPAPTAIPDSSEKLTNPVPAFTPADAI
TFPAGSYDIVLILDTREVESKTRRDEFAEALIKKGINVEQRALRLGDMLWIARRRDGWGG
EADECVLDYVVERKRLDDLCSSIKDGRYTEQCFRLGNSAISQVFYIVEDYNVAERMAYDG
PAILTAKSQLQVHAGFFLKETHRLSETIDFLVTMTNLLTSMHFQHDLKILPTKYISRSSY
TTFQDYLRKTYPRQKYLTSFEAYQSLNDKSASRTLREQWGRMLLCIKGISAERVSAVLDE
YDTPVALWRAMKQAREVGGEIRGTGVDDGVGKGAQEVVVDDVINGKGKKRKREVEGFFAE
RIKGEGRRKIGEALSVVMWNGLMGNEG
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaaaatacaatgcggcaaccccttgtttttatcttggatgcaaggtcagtta
cgcggatgtaaatctttagcttcttgtcctatcacatatccgagacctagagatttagta
tgtttaagaggaatcggacctaaaatagtcagtgtgctggagaaacggtggaaggtgcat
tgtgaggagaatggtttagctttacctggtactcctcaaagaaagacagggaagaaccga
gcccccactcctccctcagacatatcaatagatgaatccgtccccacgccctctcaagat
cctcagccttctaaaaaagctcggaaacctgtcaaacctaaggtatacgtacctcaacct
ggttcagggggatatggcatacttctcgctctcatccttgctattgatgatcctagacga
tcaacccaggttttcctcactaaaggggaggtgatgaatgcggctcaagaatactgcgat
agtagctacgagaggagtgacaagggaacacatttcacagcttggagcagtatgaaaact
ttggtaaataaaggttatgtttatgtcactggaaatccacacaagtattgtttgacagag
gagggatatgaggtagccttagccgtgagaaaccttcgacccgagttctctcacatggaa
aaacatccctttttacactctcctgctcgtgtgggatcatcgtccaaagcgccgacatcc
cacaaacccctcgactcagcgacggcctcaggaccgtccatcgttcacaaggagaagatc
gttcctaggaagtcatctgaaaaattcgagttttggtatatcgatgccttcgagtcccgc
gtacatgacatgtccgaggcgctccttcgtctcgatcccgacgaattcgtcaatatccgc
aagatcgaatttcgatttcatcagagagaccacccctttaccgctcagcttaggatagtg
gataccactgctagggtacgacatggaacggaagcaacattatatggctacatcatagaa
gatactgcgccgccaagatgttctacattctccttgtcgggagacgctcctatgaccaag
gacatatctccaccgaggctaagcaacactgctgtgacgcttaacgacgattctgcaggt
atcagcgatgacgaggattttctgcccatcatggacaagtcgactgtcattgacaggcct
acatcatcggtgactacggtacctaagtcttcctcccttctcgcagccgaagctaccgtc
catcggaatacaatcaccggtcaaagccaaactaccgcttcactaaagtcgacacgatcc
actcaagtctaccgtccagcacctagattatcctcgcacatgcctgccccgaccgccatt
ccagactcctcggaaaagctaactaatcccgtcccagctttcactccagcggatgccata
acattccctgctgggtcatacgacatcgtcttgatcttggacactcgggaggtcgagtcg
aaaactcgtcgggatgaatttgcagaagccctcatcaagaagggtataaacgtcgagcaa
cgggcgttgaggctgggtgatatgttgtggatcgccaggcggagggacggttggggaggg
gaagcggatgaatgtgttttggattatgtagtggagagaaaacgtcttgacgacttgtgt
tctagtatcaaagatggtcggtatactgagcaatgttttcgtttgggaaattcggccatt
tcccaggtattttacattgtcgaagattacaatgtcgccgaacgtatggcttatgatgga
cctgccattctcaccgctaaatcacaattacaagttcacgccgggtttttcttgaaagaa
acacatcgattatccgaaaccatcgatttcctcgttaccatgaccaatcttttgacatcc
atgcactttcaacatgatttgaaaatccttcctaccaaatatatcagtcgttcttcttac
accacttttcaagattatctccgtaagacttatccgcgacaaaaatatttgacaagtttc
gaagcgtatcagagtttgaatgacaagtccgcatcgaggacattgagggaacagtggggt
agaatgttgttgtgtatcaaagggataagcgcggagagagtatcagcggttttggatgaa
tatgatactcctgtggctttgtggagagctatgaaacaagcgagggaggtggggggtgag
atccggggtaccggcgtcgatgatggagtgggaaagggcgctcaggaagtcgtcgtggat
gatgtgattaatggaaaaggaaagaagaggaaacgagaagtagaagggttctttgcggag
aggatcaagggagaaggtagacgaaagattggagaagctctgagtgttgtgatgtggaac
ggtctgatgggcaatgaaggttga
DBGET
integrated database retrieval system