Tremella mesenterica: TREMEDRAFT_45883
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Entry
TREMEDRAFT_45883 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
tms
Tremella mesenterica
Pathway
tms00020
Citrate cycle (TCA cycle)
tms00620
Pyruvate metabolism
tms01100
Metabolic pathways
tms01200
Carbon metabolism
tms01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TREMEDRAFT_45883
00620 Pyruvate metabolism
TREMEDRAFT_45883
Enzymes [BR:
tms01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
TREMEDRAFT_45883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Dala_Dala_lig_C
ATP-grasp
BSH_RND
BSH_YknX
RimK
ATP-grasp_3
NQRA_N
BSH_YhbJ
BSH_CusB
ATPgrasp_ST
BSH_CzcB
GARS_A
ATP-grasp_4
GCV_H
BSH_ALG44
RnfC_N
Motif
Other DBs
NCBI-GeneID:
18493813
NCBI-ProteinID:
XP_007008021
JGI:
Treme1_45883
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MAEAPSAIASWVTHLGVDSTPGSPGSPAVPSIHNLRKRQAGHHGRLKKVLVANRGEIAIR
VFRTAHELAMTTVAIYSYEDRMSAHRYKSDESYIIGKGLTPVAAYLAQDEIIRIALEHNV
DMIHPGYGFLSENAEFAKKVEDAGIAFIGPRPETIDALGDKTKARTVAIKTGVPVVPGTD
GPVESYELAADFIKQYGFPVIIKAAMGGGGRGMRVVRDQDSFKENFERAVSEAKSAFGDG
TVFIERFLDRPRHIEVQLLADSQGNCVHLFERDCSVQRRHQKVVEIAPAPHLDESIRQGI
LDDALKLAHAVGYRNAGTAEFLVDQQGRHYFIEINPRIQVEHTITEEITGIDIVAAQIQI
AAGVSLEQLGLTQEHIHRRGFAIQSRITTEDAAANFQPDTGKIEVYRSAGGNGVRLDAAS
GYAGAQITPHYDSLLVKCSCSGATFEVARRKMLRALVEFRIRGVKTNIPFLMRLLTHPVF
ESGKTWTTFIDDTPQLFKLVHSQNRAQKLLAYLGDMAVNGSSIKGQSGEPGLKTEALIPS
IRDNADPTKIVDTSVPCETGWRNIIVKEGPAAFAKAVREYKGCLIMDTTWRDAHQSLLAT
RMRTVDMANIARETSHALQNAYSLECWGGATFDVAMRFLYEDPWDRLRTLRKLVPNIPLQ
ALVRGANAVGYTSYPDNAIYEFSKKAVEAGLDIFRVFDSLNYFENMKLGIDAAKKAGGVV
EGTICYSGDVANPKKTKYTLQYYLDLTDQLVNEGIHVLGIKDMAGLLKPEAARLLIGAIR
KAHPDLPIHVHSHDTAGIAAASMIAAAMAGADVVDVAIDDLSGLTSQPAMGAVCSALEQT
DLGTGISHENIQALNTYWSQIRVLYAPFEANVRASDSGVFDHEMPGGQYTNLQFQASQLG
LGTQWLEIKKKYIEANQLCGDIIKVTPSSKVVGDFAQFMVSNNLSKQDVLERAGQLDFPS
SVVEFFQGYLGQPYGGFPEPLRSNIIRDKPRIDQRPGLSMKPLDFKKIKGELREQYGAHI
NDFDVASYCMYPKVFEEFQGFVEKYGDLSVLPTRFFLGKPGIGEEMHISIEKGKTLTIKL
LAVGPLNTEKGTREVFFELNGETRAVVITDRNAAIENVSREKATSDPGSVGSPMSGVVID
VRVKEGQEVKAGDPLCVLSAMKMESVVSSPVSGKVKRVLVVENDSIAQGDLVVEITHAS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccccatcagccattgcctcatgggtcactcatctcggtgtagactcgacc
cccggttcaccaggctcccctgccgtcccatccatccataatctgagaaaaagacaagca
gggcatcatggtcgtctcaagaaagtcctcgtcgccaatcgaggagagatcgccatcagg
gtcttccggaccgcccacgaattggccatgaccacagtcgccatttactcgtacgaagat
cgaatgagtgctcataggtacaaatcggacgaatcttacattatcggcaaaggtctcact
cccgtcgctgcctacttggctcaggatgaaatcatacgtatagctttggagcacaacgtc
gatatgatccaccctgggtacggctttctgtctgaaaacgcagaatttgccaagaaagta
gaagacgccggaatagccttcatcggccccagaccagaaaccatcgacgccctaggtgac
aagaccaaggctcgcactgttgccatcaagaccggcgttcctgtcgtacctggtacagac
ggcccagtcgagtcatacgagctggcagcggatttcattaagcaatatggcttccctgtc
atcatcaaagctgctatgggagggggtggaagaggaatgcgagtggtgagggaccaggac
agtttcaaagagaactttgaacgggctgtgtcagaagcgaagagtgcctttggggatggg
acagtcttcattgagcggttcttggacagacctaggcacatcgaagttcaactcctggcc
gactctcaaggcaactgcgttcatctcttcgagcgtgattgttctgtgcaaaggcgacac
caaaaggttgtggagatcgccccggcacctcatctggacgagtctattcgccaaggaatc
cttgacgatgctctcaaacttgctcacgccgtcggttaccgaaacgcgggtactgcagag
ttcctcgtcgaccagcaaggtcgacactacttcatcgagatcaacccacgtatccaggtg
gagcataccatcaccgaagagatcaccggtatcgacatcgtggctgctcagatacagatc
gctgcaggcgtgtcgctcgaacaactcggcctcactcaggagcacatccatcgtcgtggc
tttgccatccagtcgcgtatcaccactgaagatgctgctgccaatttccagcctgacacg
gggaagattgaagtgtacagatctgcgggcggcaatggtgtacgattggacgcagcttcc
ggatatgccggtgcccagatcactccgcactatgattctctcctggtcaagtgttcgtgc
agtggggcaacctttgaggtcgctcgtcgaaagatgctccgtgctttggtcgaattccgg
atccgtggtgtcaaaaccaacatcccattccttatgcgtctcctcacccatcccgtattt
gagtctggtaaaacttggactaccttcatcgacgacacacctcaattgtttaagctcgtc
cactcccagaaccgagctcagaaacttctcgcctacctcggtgatatggccgtcaatggg
tcgtcgatcaaaggtcagagtggcgaacctggtctcaaaaccgaagcgctcatcccgagc
atcagggacaatgccgaccctacgaagatcgtcgacacttcggtaccatgcgagactggc
tggagaaacatcatcgtcaaagaaggtcccgctgcgtttgcgaaagccgttcgggaatac
aagggatgtctgatcatggatacgacatggcgagatgcccaccagtctctacttgccact
cgaatgcgtaccgtcgacatggccaacattgcaagagagacaagtcatgctttacagaac
gcttattcgctcgaatgttggggaggtgcaacctttgacgttgccatgcgtttcctgtat
gaagacccttgggaccgattgcgtactcttcgtaaactcgtacccaacattcccctccaa
gctcttgtgcgtggtgccaatgccgtcggttacacatcataccccgacaatgctatctac
gagttctccaaaaaagctgtcgaagccggtcttgacatcttccgtgtattcgattcgctc
aactactttgagaatatgaagctcggtattgatgcagctaagaaagctggtggtgtggta
gaaggtaccatttgttattcaggcgacgttgccaaccccaagaagaccaaatacacattg
caatattacctcgacctcactgatcaattggtcaacgaaggtattcatgtgttgggtatc
aaagatatggcgggattactcaaacctgaagctgctcgattattaatcggtgctatccgt
aaagctcatcctgatcttcccatacacgttcattcgcacgacactgccggtatcgccgct
gcttccatgattgccgccgctatggctggtgcggacgttgtcgacgtagccattgatgat
ctctccggtctaacctctcaacctgccatgggagccgtatgttcagctttggaacaaacc
gatctcggcaccggtatctctcacgaaaacattcaagctctcaacacctattggtctcaa
atccgagttctttacgctccattcgaagccaacgtcagagcttccgattcaggtgtgttc
gaccatgaaatgcccggaggacaatatacgaaccttcaattccaagcttctcaacttggt
ctaggaactcaatggttggaaatcaaaaagaaatacatagaagctaatcaactttgtggg
gatataatcaaagtcactccttcttccaaagttgtcggtgatttcgcacaattcatggtt
tctaacaatctttctaaacaagatgtattggaaagagctggtcaactcgatttcccatct
tccgtagtggagtttttccaagggtatttgggtcaaccttatggaggattcccggaacct
ttgagatcaaacattatacgtgataaaccgagaatcgatcagagacctgggttgagtatg
aaacctttggactttaaaaagatcaagggggaattgagagagcaatatggggctcatatc
aatgattttgatgtggcgagttattgtatgtacccgaaagtgtttgaggagtttcaaggt
ttcgtggagaagtatggggatttgagcgtcctcccaaccagattcttccttggcaaaccg
ggtatcggtgaagaaatgcacatttccatcgaaaaagggaaaacactcaccattaaactc
ttagccgtcggaccactcaacaccgaaaaaggcacccgtgaagttttcttcgagttgaac
ggagaaactcgtgccgtggtcattacggatcgaaacgcggctattgagaatgtgtctagg
gagaaggcgacgagtgacccaggaagcgtgggatcaccaatgtcaggcgtggtgattgat
gtgagggtgaaagagggacaagaagtgaaggccggggatccattatgcgtgttgagcgct
atgaagatggaatcagtagtctcatcccccgtttcgggcaaggtcaaacgtgtgttggtg
gtggaaaatgattccatcgcgcagggtgacctggtggtggagatcacccatgcgtcgtag
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integrated database retrieval system
