Tremella mesenterica: TREMEDRAFT_45889
Help
Entry
TREMEDRAFT_45889 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
tms
Tremella mesenterica
Pathway
tms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TREMEDRAFT_45889
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tms01007
]
TREMEDRAFT_45889
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_45889
03029 Mitochondrial biogenesis [BR:
tms03029
]
TREMEDRAFT_45889
Enzymes [BR:
tms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
TREMEDRAFT_45889
Amino acid related enzymes [BR:
tms01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
TREMEDRAFT_45889
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TREMEDRAFT_45889
Mitochondrial biogenesis [BR:
tms03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
TREMEDRAFT_45889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
18493814
NCBI-ProteinID:
XP_007008022
JGI:
Treme1_45889
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MTSHASVSQPSTLAQPINKSAHAFDKVMLDAMLARRFFFAPAFEIYGGVAGLYDYGPTGS
ALQANILDAWRKHYIIEEDMLELDTTIMTLSDVLKTSGHVDKFADWMCKDVQTGEIFRAD
HLVEAVLEARLKGDKEARGVKEEVEVEEDDKKKKRKKNVKTVAVKLDDEVVAEYESLLAQ
IDNYTGPELGELIRKHKIVNPSTGNEMTEPVEFNLMFESNIGPTGQIKGYLRPETAQGHF
VNFARLLEFNNGRVPFASAQIGRSFRNEIAPRQGLLRVREFTMAEIEHYVDPLDKRHARF
AEVKDVKLALLPKNVQSEGKTDITHMSVGEAVAQKIIDNETLGYFLGRTQLFLIKIGIDP
ERLRCRQHMANEMAHYAADCWDFEIQSSYGWIECVGCADRSAYDLTVHSVRTKQPLRVQV
KLDQPRVVEKLECTFDAKAFGMKFKKEAGMLKETLAGMDRDRLQCVKDELETGVASVKGT
DGKSYEISSELLKIEPVIVTEHVREFTPNVIEPSFGIGRILYSLLEHSYWAREADKARVV
LSLPSLVAPIKCLIVTISQDPQLRTLIHDISHKMRKLGIASRVDDSSASIGKKYARNDEL
GTPFGCTVDFASLQKGTMTLRERDSTSQLIGPIDTVIDVVDRLVKGTIDWQGATEVLETY
SGVQDVE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccacgcttccgtctctcaaccctccacattggctcaaccaatcaacaaatcc
gctcatgcctttgacaaggtcatgttggatgccatgttggcaaggaggttcttcttcgca
cctgctttcgagatctacggtggtgtcgctgggctgtatgattacggtcccaccggttca
gccttacaggctaacatattggacgcttggagaaaacattatataatcgaagaagacatg
ttggaattagacaccaccatcatgactctatctgatgtgctcaaaacttctggtcacgtg
gacaaatttgccgactggatgtgtaaagacgttcaaacgggagaaatattccgagcggat
catctcgtcgaagctgtccttgaggctaggttgaaaggcgacaaagaagctcgtggtgtc
aaagaagaagtcgaagtggaggaagacgataagaagaaaaaaaggaagaaaaacgtcaaa
actgtggctgtgaagttagatgatgaggttgtagcggagtatgaaagtctcctcgcacaa
atcgacaattacaccggaccagaattaggcgagcttatacggaaacacaagatcgtcaat
cccagtacggggaatgaaatgacagagccggtggaattcaacttgatgttcgagagtaac
attggtcccaccgggcagatcaaaggctaccttcgaccggaaacagctcagggacatttt
gtcaatttcgcgaggttattggaattcaataatggtcgtgtgccttttgcctccgcacag
atcggtagaagtttcaggaacgaaatcgcacctagacaaggtctactccgtgtccgtgag
ttcacaatggcggaaatcgagcattatgtcgatcctctcgacaaacgacatgcccggttt
gcagaagtgaaagatgtcaaacttgctcttctccccaaaaatgttcaaagtgaggggaaa
acggatattacgcatatgtcagttggagaagctgtggctcagaaaatcatcgacaatgag
acgttggggtatttcctgggcaggacacaattattcttgattaaaatcggtattgatccc
gagagattgagatgtagacagcatatggcgaatgagatggctcattatgcggcggactgc
tgggactttgaaattcaatcgtcttacgggtggatcgaatgcgtcggatgtgccgacaga
tcagcgtacgatctcaccgttcattccgtccggactaaacaacctttacgagtccaagtg
aaacttgatcaacctcgggtggtggagaaattggaatgtacctttgacgctaaagcattc
gggatgaagttcaagaaagaagctgggatgttgaaggagaccttggcgggtatggatagg
gatcgattgcaatgcgtgaaggatgagctggaaacgggtgtggcatcggttaaagggacc
gacgggaagtcatatgagatcagctctgagttattaaagatcgaacctgtcatcgtgaca
gagcatgtgcgcgagttcactcctaatgtcattgaaccttccttcggtatcggcagaata
ctttactctctcctcgaacatagttattgggctagggaagcagacaaagctagggtggtc
ttgtctctcccgtcgttagtcgcgcctatcaaatgtttgatcgtcaccatctcacaagat
cctcaacttcgaacactcatccatgatatctcccataaaatgagaaaacttggcattgct
agccgagtagacgactcttccgcttccatcggtaagaaatacgctcgtaatgacgaactg
ggtacgccgttcggatgtacagtcgatttcgcctctctgcaaaaaggaacgatgactcta
cgtgagcgtgattcgacttcgcaattgatcggacctatcgacaccgttatcgacgtggtg
gatcgattggtgaagggaactattgattggcaaggggctacagaggtgttggagacgtat
agtggtgtgcaggatgttgaataa
DBGET
integrated database retrieval system
