Tremella mesenterica: TREMEDRAFT_46085
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Entry
TREMEDRAFT_46085 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_46085
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
TREMEDRAFT_46085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
TPR_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_GEMI5
Beta-prop_WDR19_1st
TPR_IF140-IFT172
Utp8_b_propeller
Motif
Other DBs
NCBI-GeneID:
18493837
NCBI-ProteinID:
XP_007008279
JGI:
Treme1_46085
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MVGSVDSGIKAAAWSPDEEQLILVTGDDNLVCMTRDFDLTHEEPLRKDTFGEVDEFINVG
WGSKTTQFHGSLGKAAALASSSSKPSSLSHPTDDTLPRITFRGDAAFFAISSLDPYRDSD
HGRRQIRIYSRDAMAGFSPKLSATSESLPGLEGPIAWRPSGNLLSGLVRYGYPGGAEGKE
GRWEVAMLERNGLRHGGFELREEKKVWENGKVKGMIWNADSEVLAIWIERETEDVVQLWT
MKNYHYYLKQELFSITPSSRLRGFRWHPEQPLTIFLFGEDHIQSRSFAWDTYISRLPMPN
DTASVAVVDGNRLLVTPFRTQITPPPMSSYTLQLPSQPVHVSFCSTQDTLAIVFRDGSVQ
VWDLGTRMPDKGVSKLRAGGMVADPKLRWASEPYESKHGLASQVALADDGSVGILCHASE
PQHSTCHLLVLSSDGSRKSIPVESANRILHDSQIGWLTCGDEGMLRSTDNNLEVQLCPNP
LSIAVFSESSLIFALSPSGKLYLASLSPGSQSDSSIIASSVTSFTLTPDFLIYTTASQTS
FYPPLNTLSRIASGEDVPASEREWELRRVERGSLAVVACPSSMSLVLQMPRGNLETIYPR
PLVLAVVRRGILAGQYREAFLTCRKHRLDLNILYDLSPDQFMKQLPEIVRNIPEVDYLNL
LVSSLREESRSQDLYKGIDTDPASGLQNGKINRICDAVRDLLEEIDLVKYVETILTSHIC
KVPSDYEAGLRVLLRLQDDHPDVVEDAIKYIIFLSDVNKLYDVALGMYNFQLVLMIAQYS
QKDPKEYLPFLRELRALDQYEQRYRIDDHLGRRVSALRNLHAAGPEKFEEASSYLARYEL
YDEAFKLYKEDTERLPIIYDLYGDYLYDRRDFHEAALAYTSASKPLKTLKAYEKAHAWRE
LFSLAINQQLSSDEMKSLSERTSEYLASRGRHLEAARILVDHAGDVDTAIEVVCQGGEFA
EAQRLAAMYDRPNLVQSIILPAMEKTQEEILETFEEMQGQLEKEMSRLGELREIRKNDPD
RFYIVEREELEGVDVVTNASTAVTNFTRYTVAPTTITQVTRMTGQTNKSKYKPSKKRATG
RKGTVDEYEYLISSLGRLVIRTEEKSAEALTLLRHLLIPLPDLAQSLQSYILSFRLRLTL
ALEDAWKDRESVLGEVISSGGMGLGGDPTSALEIVRPKVEEWRGLGMLVI
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcagcgttgacagcggcatcaaggctgcagcgtggtcaccggatgaagagcaa
ctgatcctcgtcacaggggatgacaatctcgtttgcatgactcgggatttcgatctgaca
catgaagagccattgcgaaaagatacatttggcgaggtagacgagtttatcaacgtcgga
tggggttctaaaaccactcagttccatggttccctcggaaaagcagctgcactagcttct
tcctcttccaaaccatcatcactatcacatcctacagacgacaccctaccccgtataacc
tttcgaggagatgctgccttttttgccatatcatctcttgacccttatagagattctgat
cacggaagaagacaaattcgaatatactctcgggatgcaatggctggcttctcccctaag
ttatccgccacctcggagtctctgccaggattggaaggtcctatagcttggcgacctagt
gggaatttactcagtggattggtacgttatggttatccaggaggagcggaaggaaaggaa
ggaagatgggaagttgcgatgttagaacgtaatggtcttcgacatgggggtttcgaatta
cgggaagagaaaaaagtctgggagaatggcaaagtcaaggggatgatttggaatgcagac
tcagaggtactagctatctggattgagcgtgaaacagaggatgttgttcaattgtggact
atgaagaattatcattattacctcaaacaagaacttttttcgatcactccgtcatcaaga
cttcgaggatttagatggcatcccgaacaaccactcacaatctttctctttggcgaagac
catattcaatccagatcttttgcttgggatacatatatctccagattgcctatgccaaat
gataccgcttcggtcgctgttgtggacggcaatcgcctactggtcactcccttccgcaca
caaatcaccccaccgcccatgtcatcctacaccctgcagcttccttcccaacccgttcac
gtcagcttttgctctactcaagatacactagccatcgtcttcagagacggcagcgtacaa
gtctgggatctaggcacccgtatgccagacaaaggggtatcgaaattaagagcaggtgga
atggtggccgatccaaagctgcgctgggcttccgaaccgtacgagtcgaagcatggactc
gccagtcaggtagctctggcagatgatggttcagtggggatattatgtcacgcatcagaa
ccccaacactctacctgtcatctacttgtcttgtcttcggacggttcgcgcaagtccatc
cccgtcgaaagtgctaatcgcattctacatgatagtcaaataggatggctaacttgtggt
gatgagggtatgctacgcagtacggataacaatttagaagtccagttatgcccaaatcct
ctctcgatcgccgtcttctctgaatcatccctcattttcgcactttcgccttccggcaag
ctctatctcgcctccctctcaccaggtagccaatccgactcatccatcatagcctcatca
gttacctctttcactctcactcctgacttcttgatctacaccacagcctctcagacatcg
ttttaccctcctctcaataccttatctcgtatcgcttctggtgaagatgtccctgcctct
gaaagagaatgggaactcagacgagtggaacgagggtctttggctgtagtagcatgtccg
agctctatgagtcttgtcctgcagatgcctcgaggtaatctggagactatatatcctcga
ccccttgttctcgctgtagtacggagaggcatccttgcaggtcaatacagagaggctttc
ctcacatgtcgcaaacatcgtttagacctgaacatattatatgatctgtcaccggatcag
tttatgaaacaattacctgagatcgtgcggaacattccggaggtggattatttgaacttg
ctcgtttcttctttacgggaagagtcacgctcacaggacttgtacaaaggtatagacaca
gaccccgcaagcggcctacaaaatggaaagatcaaccggatttgtgatgctgtacgagat
ctactggaggagatcgacctagttaagtatgtcgagactatcctgaccagtcatatctgc
aaggtcccatcggattacgaagctggtctacgggtcttgcttcggttacaggacgatcac
ccagacgtggtcgaagacgctataaagtacatcatcttcttatctgacgtgaacaaactg
tacgatgtcgctttggggatgtacaactttcaattggttctcatgatagctcaatactcg
caaaaggacccaaaggaatatctcccttttttacgcgaacttcgagcattggatcaatat
gaacaacggtatcggatcgatgatcatctcggtcgacgtgtcagtgctttgaggaacctc
catgcggctggtccggagaaattcgaagaagcttcatcttatttggctcgttatgaatta
tacgatgaagcgttcaaactttataaagaagacaccgaacgtctgcccattatctatgat
ttatatggtgattatctatatgaccgaagagattttcatgaagctgcattagcatataca
tcagcttccaaaccattgaaaactctcaaagcgtacgaaaaagcacacgcatggagagaa
cttttttcacttgcaatcaatcaacaactctcttcagatgagatgaaatctctgtccgaa
agaacctcggaatatctggcttcgagaggtagacatcttgaagctgctcgtatacttgtc
gatcatgcgggggatgttgacacagccatcgaggtagtttgtcaaggaggagaatttgct
gaggcacaacgtttggctgctatgtatgatcgaccgaatcttgtgcaaagtatcatttta
cctgctatggaaaagacacaggaagagatattagaaacgtttgaagagatgcaaggacag
ttagaaaaggagatgtcaagacttggagaattgagagaaatcagaaagaatgatccggat
aggttttatattgtcgaaagggaagaattggaaggtgttgatgtggtaactaacgcttct
actgcggtgacgaattttactaggtataccgtggcacctaccaccattacgcaagtgacg
aggatgacgggtcaaacgaataaaagtaaatataaaccttcaaagaagcgtgcgacgggg
agaaaaggtacagtggacgaatacgaatatcttatttcttcgctcggtcgattggtcatt
cgaacagaagagaagagcgccgaagctctcaccctccttcgtcacctactcattccactc
cctgacctagctcaatctcttcaatcttatatcttatcattccgccttcgactcaccctc
gccctggaagatgcatggaaagacagagagtctgtgctcggggaagtcatctcgagtggt
ggaatgggtctaggaggtgatccaacgtctgctttggagattgtgagacctaaagtggag
gaatggagaggattggggatgttggttatttga
DBGET
integrated database retrieval system
