Tremella mesenterica: TREMEDRAFT_56308
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Entry
TREMEDRAFT_56308 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tms
Tremella mesenterica
Pathway
tms03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TREMEDRAFT_56308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_56308
Spliceosome [BR:
tms03041
]
Common components
Common spliceosomal components
SR proteins
TREMEDRAFT_56308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
18493923
NCBI-ProteinID:
XP_007002601
JGI:
Treme1_56308
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MSNRRVYIGHLPPNVTKTDVEDVFKGLGPILDVRILGNYGFVEFESSRDAEDALRDYNGV
SLLGENIIVEAPRERRRDAYGPGVGGYRGGDAPPRGPPRRGVRINVVGIPGSTSWQDLKD
YGRLGSNMVTYADVDRYNPGVGVIEYPTMGEAEEAMSRLAGVDINGQPVRLELAPAGAGG
DDRDRRPPRDYERPRYDDRGPPRRDYGDSYNRGGDSYSRGGGDHYGGRSSGRYDPPRRDH
DREREPYRERDRARSPRREERYDRSSEYKNGGY
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcgtcgcgtctatatcggtcatctaccccctaacgtcacaaagactgatgtc
gaagatgtcttcaaaggactaggtcccatcctggatgttcgtatcttgggcaattacggt
tttgtcgaatttgaatcttctcgtgacgcagaagacgccctaagagactacaacggtgtt
tccctcctcggtgaaaatatcatcgttgaagctccccgtgagagacgtagggacgcttac
ggtcctggcgtcggagggtatagaggtggggatgcaccgcctcgtggaccaccgagaagg
ggcgtgagaatcaacgttgttggaattcccggcagcacgagttggcaggatctcaaagac
tacggtcgtctcggaagcaacatggtgacctacgccgatgttgataggtacaatcctggc
gttggggtgatcgaataccccactatgggagaagcggaagaagccatgagtcgtttggcc
ggtgtcgacattaatggacagcctgtcaggctcgagctcgctccagcaggtgccggtggt
gacgaccgtgaccgtcgtcctccccgtgactatgaacgtccaaggtacgacgaccgcggt
cctcccagacgagactatggggattcttacaaccgcggtggtgactcttactctcgagga
gggggggatcattatggtggtcgttcttcgggtcgatacgatcctcctcgaagggatcat
gaccgtgagcgtgaaccgtacagggaaagagacagggctaggagtcccaggagggaagag
aggtatgatcgttcatctgaatataagaatgggggttattga
DBGET
integrated database retrieval system
