Tremella mesenterica: TREMEDRAFT_56379
Help
Entry
TREMEDRAFT_56379 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tms
Tremella mesenterica
Pathway
tms00260
Glycine, serine and threonine metabolism
tms00460
Cyanoamino acid metabolism
tms00630
Glyoxylate and dicarboxylate metabolism
tms00670
One carbon pool by folate
tms00680
Methane metabolism
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
tms01200
Carbon metabolism
tms01230
Biosynthesis of amino acids
tms01240
Biosynthesis of cofactors
tms04981
Folate transport and metabolism
Module
tms_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TREMEDRAFT_56379
09102 Energy metabolism
00680 Methane metabolism
TREMEDRAFT_56379
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TREMEDRAFT_56379
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TREMEDRAFT_56379
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TREMEDRAFT_56379
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TREMEDRAFT_56379
Enzymes [BR:
tms01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TREMEDRAFT_56379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
18493932
NCBI-ProteinID:
XP_007002610
JGI:
Treme1_56379
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MSSSIPIPEDFNSCLYKPLAEADPEVAKIVEQETWRQFSGLELIASENLTSLAVMEANGS
ILTNKYSEGLPGARYYGGNEYIDILENLCRERALKAFNLDPKVWGVNVQPYSGSTANFAA
FTALINPQDRIMGLGLPDGGHLTHGYYTAKKKITASSIYFQSFPYRVIPETGYLDYQQLE
TNANLYKPRLVVCGGSAYPRDWDYARLRKIADSQGAYLLSDMAHISGLVAAAEQNSPFEY
CDVVTTTTHKTLRGPRAGLIFFRKDKEADLEARVNAAVFPACQGGPHNNTIAGIAVALKQ
AADPAFKAYAKQVRANAAAMANVLFRYGYKLQTDGTDNHLILWDLRPIGLTGSKVEKICD
AAHITLNKNAVAGDTSALVPGGVRIGASALTSRSMVEKDVEQVAEFLHRVVQISLATQKE
AGSKLLKDFVKAYESGNGESPKLIAQLKEDVVKFATSFPLPGVLDTSKIVRGE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttccattcctattcccgaagatttcaacagctgcctgtacaagcctctggct
gaggccgacccagaagtggccaagatcgtcgagcaggagacatggcgtcagttctctggt
ctcgagctcattgcgtccgaaaacttgacctctctggctgtgatggaggcgaacggatct
atcctcaccaacaaatactcggagggtcttcccggcgctaggtactacggaggcaacgag
tacatcgacatcctcgagaacctctgtcgggagcgagccctcaaggccttcaacctcgat
cccaaggtctggggtgtaaacgttcagccttactctggatcaactgccaactttgccgcc
ttcacggccctcatcaaccctcaggacaggatcatgggtctcggtcttcccgacggtggt
cacttgactcacggctactacacagccaagaagaagattacagcctcttccatctacttc
caatctttcccttaccgcgtcatccccgaaaccggatacctcgactaccagcagctcgag
accaacgccaacctctacaagcctcgtttggtcgtatgtggtggctccgcctacccccgt
gactgggactacgctcgtctacgaaagattgccgattcgcagggagcctacctcttgtct
gacatggcacacatctctgggcttgtagctgcggccgagcagaactcgccgtttgaatac
tgcgatgtagtcacgactacgacgcacaagactctccgtggtcccagggctggattgatt
ttcttcagaaaagacaaggaagcagatcttgaagccagggtgaacgctgctgtcttcccc
gcttgccaaggtggtccccacaacaataccatcgccggtattgccgtcgctctcaagcaa
gctgccgatccagctttcaaggcatacgcaaagcaagttcgtgccaacgccgccgctatg
gcaaacgtcctcttcagatatggctacaagctgcagactgatgggaccgacaaccatctg
atcctctgggatcttcgtcccatcggtttgactggctccaaagttgagaagatctgtgac
gctgcgcatatcacgttgaacaagaacgccgtcgccggtgacacgtccgccttggttcct
ggtggtgtcagaattggtgcttccgccctcacctcgcgttctatggtcgagaaagatgtc
gagcaagttgccgaattccttcaccgtgtcgttcagatctcccttgctacccagaaagaa
gctggctcgaagcttctcaaagactttgtcaaggcgtacgagtctggtaacggtgaatct
cccaaactcatcgctcaactcaaagaggacgtggtgaaatttgccaccagcttccctctt
ccgggcgttcttgacaccagcaagattgtccgtggcgagtag
DBGET
integrated database retrieval system