KEGG   Tremella mesenterica: TREMEDRAFT_57929
Entry
TREMEDRAFT_57929  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
tms  Tremella mesenterica
Pathway
tms04138  Autophagy - yeast
tms04144  Endocytosis
tms04517  IgSF CAM signaling
tms04519  Cadherin signaling
tms05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:tms00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    TREMEDRAFT_57929
   04519 Cadherin signaling
    TREMEDRAFT_57929
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    TREMEDRAFT_57929
   04138 Autophagy - yeast
    TREMEDRAFT_57929
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    TREMEDRAFT_57929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tms04131]
    TREMEDRAFT_57929
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tms04812]
    TREMEDRAFT_57929
Membrane trafficking [BR:tms04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    TREMEDRAFT_57929
Cytoskeleton proteins [BR:tms04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     TREMEDRAFT_57929
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_EML_2 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_RIG_2nd RMC1_N WDR55 Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Tricorn_2nd DUF2788 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd PD40 Beta-prop_WDR36-Utp21_2nd Rax2 Vps16_N DPPIV_N Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 18494115
NCBI-ProteinID: XP_007008295
JGI: Treme1_57929
LinkDB
Position
Unknown
AA seq 410 aa
MSAPEVFQLSMGPLTGVAFSPDRSQVAVSPNSNEAQIYTKVGNEWELKQTLAEHDKLITA
ISWAPQTNRIVTCSQDRNAYVWTPVGDAWKPALVLLRINRAATSVKWSPREDKFAVGSGA
RTIAVCSFDEENNWWVSKHIKKPLRTTVLNIDWHPNNVLLAAGAADAKAYVFSAFIKGVD
QKPEPTVWGDRLPFGTICGEFSSPNGGWVHDVAFSPSGDVLAFVGHDSSISIIYPSGPGT
PPTAHISIRLPSLPLLSLTFTSEAQIIAAGHDCQPLVFSGSSSGWTLTHSLDDPSATGTR
ALTPSHTGSRVSSGGPGRLNNEAFQLFKAADSRGQSKTAIGSPTSAGMTPVGQDGLLLTV
HQNSITLVEPYEWSSTGDVAKVSTAGKDGRLVVWPVVGKGLSGRMAGLSV
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgtcagctccagaggtatttcagctctctatgggtcccctcacgggggtggctttcagt
cctgatcgttctcaggtagctgtgtcacccaacagtaacgaggcacagatctacaccaag
gttggaaatgaatgggagctgaaacagaccttagccgagcacgacaaactcatcactgcc
atctcctgggcgccacagaccaatcgtatcgtcacatgttctcaagatcgcaatgcctac
gtctggactccagtgggagacgcatggaaacctgcccttgttcttttacgtattaatcga
gccgctaccagtgttaagtggtctccaagggaagacaagttcgccgtcggatcgggagct
cggaccatcgccgtttgttcattcgatgaggagaacaattggtgggtaagcaaacatatc
aagaaacctcttcgtacgactgtcttgaacatcgactggcatcccaacaacgtcttgctg
gcggcaggtgcggcggatgccaaggcttatgtgttctcggcgttcatcaaaggcgtggac
cagaaacctgagcccactgtctggggcgaccgtttgccattcggtaccatttgcggagaa
ttctccagtcctaatggtggttgggttcatgatgttgcattttctccctccggtgacgtg
ctcgcttttgtcggtcatgattcctccatttccatcatttacccttctggacccggtact
ccacctaccgctcacatctctatccgtctcccatcactcccattgctgtctctgaccttc
acctctgaagcacaaatcatcgctgcaggtcacgactgtcaacccttggtattcagtggc
tcgtcttccggctggaccctcactcactcgctcgacgacccctccgccactggcactcga
gcccttacgccttcgcatactggttcccgagtatcttcgggtggtccgggcagactcaac
aacgaagccttccagctattcaaagctgcagattcgagaggtcagagcaaaacagctatc
ggatctccgaccagcgcgggcatgaccccagtgggacaagatgggttgttgttgacagtg
catcagaactccatcaccctcgtcgagccatacgagtggagcagcacaggcgatgtggcc
aaggtgtccacggcagggaaagatggaaggctggttgtttggcctgtggtaggcaaggga
ttatctggcaggatggcagggttgtcggtgtaa

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