KEGG   Tremella mesenterica: TREMEDRAFT_58042
Entry
TREMEDRAFT_58042  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tms  Tremella mesenterica
Pathway
tms03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TREMEDRAFT_58042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tms03041]
    TREMEDRAFT_58042
Spliceosome [BR:tms03041]
 Complex A
  U2 snRNP components
   U2 related factors
    TREMEDRAFT_58042
 Complex B
    TREMEDRAFT_58042
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4
Other DBs
NCBI-GeneID: 18494157
NCBI-ProteinID: XP_007001118
JGI: Treme1_58042
LinkDB
Position
Unknown
AA seq 228 aa
MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSSTILLPNVYNNPAHTPE
GQNMTPEQLQQNFDNFYEDFFIELCKYGNLQEMHVCDNVGDHLMGNVYARYEYETEASKA
CDALNDKWYAMKPLMAELSPVSDFREACCRQNEMGECVREGFCNFMHLCHPSKSLVSSLQ
ASQRLSRRRNANNGGTDDQDLGWTPSVAAVGEWRPGKKVDGPSWRDVH
NT seq 687 nt   +upstreamnt  +downstreamnt
atggcttctcatctagcgaacatctttgggacagaacaggatagagtcaattgttctttt
tacttgaaaatcggtgcttgtagacatggtgatcgatgttctcgaaaacatatcaaacct
caattctcaagcactatactcttacctaacgtatacaacaacccggctcatactcccgaa
ggacagaacatgacaccagaacaattacaacagaattttgataatttctacgaagatttt
ttcatcgaactatgtaaatacggaaaccttcaagaaatgcacgtatgcgataacgtcggt
gatcatctgatgggaaacgtttacgcaagatacgaatacgaaactgaagcatcaaaagct
tgtgacgcattaaacgataaatggtacgctatgaaacctctaatggctgaattatcaccc
gtcagtgatttcagagaagcttgttgtaggcagaatgaaatgggtgaatgtgttagggaa
ggtttctgcaactttatgcacttatgtcatccttcgaaatcactagtatcatcacttcaa
gcatctcaacgtctttcaagaagacgtaatgccaataatggaggtacggacgatcaagat
ttaggttggacacctagtgtagcggcggtaggtgaatggagacctggtaaaaaagttgat
ggaccaagttggagagatgtacattag

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