Tremella mesenterica: TREMEDRAFT_59006
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Entry
TREMEDRAFT_59006 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K24939
CWF19-like protein 1
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_59006
Spliceosome [BR:
tms03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
TREMEDRAFT_59006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CwfJ_C_1
zf-CCHC_2
CwfJ_C_2
zf-CCHC
P3A
Motif
Other DBs
NCBI-GeneID:
18494515
NCBI-ProteinID:
XP_007001476
JGI:
Treme1_59006
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MAHQPQPLKILAIGSPLSALGTLVDKVTSINSKHGPFDACVIVGDLFKQDSDGSELGSLA
SVFPVPTYFTIGKYALPQSVKDKIEETGGEVVRNLVFLGKSGVLSTAQGLKIAYVGGTYD
EETYNIPSSENSSTSTISQNDVNALLSNPLISPATKVEDSLASARDGTSVLPSPFQGIDL
LLTSPPPPSLSLLSPSFPSSGISLATPAPPLAEVIRRARPRYLFWADGEGFWEREPWGWS
GSDGKEERWTRAVKLGALGGETSEGGKKPRWFYAFSLPAQTPTTALPKRPANATPNPLVL
ASAPAHNERKRPPLEDQHVIAREESTMKKGRTGPTGPPDSYICKVCKVPGVDCPQRKEVD
HTKPPPNYSCKICGSHEHFIRECPEKDKSDAPRNTQGRRVPSQNYVCRACGAGGQHYLRD
CPVHVEKEQEKHKKKELGPAECWFCLSNPKVTKHLIVAIGSETYVTLPKGQLIPTTAAQV
AQGGFKPLVPGGGHVLIIPIAHHPTLMSIPAEDAMSIITELESYKSSLRACYAAYQAVPV
TFEIGRLSGRGGHAHVQVVPVPKELTDKVAHAFRVAGEKQGIDWEDEPERALARVGPTGN
YFKVECPDGTKMVHLLKGNFDLQFGRMILAGLLGLPHRIDWKDCGQTEAEEKEDAQKFKK
AFAPFHS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcaacctcagccattaaagatcctcgcaataggctcgcccctgtctgccctc
ggcacccttgtagacaaggtcacctctatcaactccaagcatggtcccttcgatgcttgt
gtcattgtcggtgatctcttcaaacaggatagtgacggtagcgagctgggatccctcgca
tcggtcttcccggtcccaacgtacttcacgatcggcaagtatgccttaccgcagagtgtg
aaagacaagatcgaagagaccgggggcgaggtcgtgcggaatctcgtgttcctaggaaag
tctggggtactcagtacggcccaaggtttgaaaattgcctatgtgggtggtacatatgat
gaagaaacgtataacattccctcatctgaaaactcatcgacgagcaccatctcccaaaac
gacgtgaacgccctcctctccaatccacttatctcgcctgctaccaaagtagaggacagt
cttgcctctgccagagacggtacctctgtactaccctccccatttcagggaatagacctt
ctcctgacttcccctcctcccccgtccctatctctcctctcaccatcattcccctcttct
gggatatctcttgctacccccgctcctccgcttgcggaggtcatcaggagggccagaccg
agatatctattctgggctgacggagagggcttctgggagcgtgaaccgtggggatggtca
ggatcagatgggaaggaggaaaggtggacaagagctgtcaagttaggagcgttaggtggt
gagacgtccgagggtgggaagaagccgagatggttctatgctttctccctcccagcacaa
acacccactactgccttacccaagagacccgccaatgctactcccaatcccctcgtcttg
gcctcggcgcccgcacataacgagcgtaaaagacctccattggaagatcagcatgttata
gcgcgagaggaaagtacgatgaagaagggtcgcactggtcccacaggtccacctgattcg
tacatttgcaaggtgtgcaaagtgccaggcgtagactgcccacaaagaaaggaagtcgac
catacgaagccccctccaaattactcgtgcaagatatgtggatctcatgaacactttatt
cgagagtgtccagagaaggacaagtccgatgcacctcgcaatacacagggtcgtcgtgtg
ccttctcagaattatgtctgcagagcgtgtggagcgggtggccagcactaccttcgtgat
tgtccggtgcatgtcgaaaaggagcaggagaagcataagaagaaggaacttggtcctgca
gaatgctggttctgcttgagtaatcccaaagtcaccaagcacctcattgtggccatcggt
tctgagacctacgtgacgcttcccaagggtcaactcatacctacgacagccgctcaggtt
gcacagggagggttcaaacctctcgtccccggtggaggtcatgtgctgattatccccatt
gcacatcatccgacattgatgtcgattcctgccgaagacgcaatgagcatcatcaccgaa
ctcgagtcttacaaatcttcattacgagcatgctatgcagcttatcaagctgttccggtc
actttcgaaatcggtcgcttgtcgggtcgcggaggacatgcacatgtacaagtcgttccg
gtgccgaaggaattgaccgacaaagtagcacacgctttcagggtcgcgggagagaaacaa
gggatagattgggaagacgaacctgagagagcattggccagagtggggccgacgggaaat
tacttcaaggtcgaatgtccggatggcaccaagatggttcatttgctcaagggaaacttt
gatctccaattcgggaggatgatcctagctgggttattaggactgccacatcggatagat
tggaaggactgcggtcagacagaagcggaggagaaggaagacgcacaaaagttcaagaaa
gctttcgctccgtttcattcatga
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