Tremella mesenterica: TREMEDRAFT_59198
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Entry
TREMEDRAFT_59198 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
tms
Tremella mesenterica
Pathway
tms04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TREMEDRAFT_59198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_59198
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
TREMEDRAFT_59198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
HEAT
Cnd1
Adaptin_N
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
18494594
NCBI-ProteinID:
XP_007001555
JGI:
Treme1_59198
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MDNLSHPGRQDVPQGSNGQSSTGIWGDPANLMRVYPIPAYTPTARVANHIASNATTYLPS
ISPSEAYPQYTNVFERMDHPQSEEDQQLRQQAELQIRQLLTSSGQSYLPTPSYTSSYSST
PTDGPNNLPKLPMPYTFLPSYLPSGGYREPPTPTSIISSNPSPLHAPETPSPAKEYFENY
VDRVLKSQPVPPSESESEPSSSRPPSITSTPHLSRTLARTALTPDESPDALTGPSPSKRR
KQGRQVDSQSPSVRLSLGSKGFPIGNPPKPRKSRDETPTPTQARVKSVSISPSQVQVVIP
TRKSSLSIQDEEESDEDELDWGETEKDEDWVMRDNDEMYRPQTPEYRATPPMGSGRTGER
DTRTNLQRLQTLCEDIFEEADNFPAEISTEDVGGSQFFSAISKEGDAALLSAASMDKLIR
YVSRVQGTRRKFKHSDELLQLEVEVIKRLFRLLERRLREVEDIVIFPDDVSANMKAKGKG
GKAKRGKKSSKSPEKDVNDTMPDSQQSTNRASPTSDEMMTSERLDKLGHDLKLIEAGGLA
AQCCLLILDSEGLPKPLYSEDMISASIRVVKDQITKVILPLVHGLAGGKSSSRALSHVVD
EELQLAKKSKNKTISPFFQNPVLLVIAQSASTTLRHLSSMMSRPDLSFPDTLVIQNVYLS
IEPLFAADPVNVTKKKGRESGKDVGVSIMKTLRTEALGCLRGAFAKYEGQRQWIIEEILG
SLAKVPEQNASQARFQLSDGSSISTTSALLLQLIQASTFVVISQIRRLRTTVVDMNSSSS
SLVPTDTSDEELRLLTDAMDASVKSARVVASYLVQRSSTAKATKTSRDTDYKVVLETFVK
DLLEVLYRPEWPAASLYISLISRLMRIADVLTSVVEEQKGGNETSTARSIALDHLGDIAA
RLREMHLKMKAGHNVPSTDDLISNPSADGCTSLLKAQHLIASFLSTAAGEDAMFSGARDM
SSIIWAQELHAAISKGTSVVEKVAKEKGEEAEETREQLQVIIQALRSALLNVWNSDENVF
GTSDPQIGEHAVSAAVAIARGRSLQNAFEPILHAIISAMDSPAVAHRQKALRGISSVVTV
DPDILGLVHVRHAIEDRLSDGSPAVRDAAVELVGKYIVQQPQLAVEYYPQIALRVNDSGL
GVRKRVIKLLRGIFSSVEDRVVRVDICCKLVGAMADTDDTVQDMALKGLMEILYPQGGNV
HSALLLVEIIGEFQGSDTLLKKALQGIIKECEKTSRTASIQETVEVLIRQLVDATEQADF
DALSHIRAIHLLCASLPALIDTNQATVLLSYLRPPANTDEQATNDELLRIFQKCIPHMPR
TASTFATDLVKALLPMISKPAGGFQALKETIGCFCVVTTCLTRDYTRLIAVLRACENKIR
AFHKALKDGQTPNVQAAAMMLYITALIAEHCNLDQVAVTNESVKTELVKITDGLLYEYLF
YLYLQFTHLPIPQTAPSICLGCLFHTYPALVLRDEALDWMNQVFSSPDMDNRARLLGVIH
DFLSSEVEKKTAGQGNKDLTALIGSATDLSESGVSTAVLQRNIEHILSGAKSQHPPTQNS
ALDVLAFTVNQGLYHPLQCLPILISLETSIEPNVADRALDLHATLHQKHSTLVNVRYLDF
AKESYDYQRSMSSEVCGHRNGVALLAPWFGLPDVGFILYISENLATLEYKLQEEIITIIQ
SLSNIISTSHNLSELLESGQLDPSSSPIEEISNKEWVSEVGERNPAGVIIDCSIVVSLAI
MTKNHLLDLYSLAEDKCLKHTLGKKTALGDKPAIKKGPTGLDLSVDPLVRGVGTVEEFEM
QRQTFMRLVRDEGLEDL
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggacaatctgtctcacccgggacgacaagatgtccctcagggatcaaatggacaaagt
tcaacgggtatatggggtgatcctgctaatctaatgagggtgtatcctatacccgcttat
acgcctactgccagagtcgcaaatcatatagcatcgaacgcaactacttatctaccttcc
atctcaccatctgaagcttatcctcaatatacaaacgtttttgagagaatggatcatcct
caatctgaagaagatcagcaactgagacaacaggctgagctacagatcagacaattactc
acatcttctggtcaaagttatcttccaactccttcttacacttcttcttactcctctaca
cccacagatggaccgaacaacctaccgaagctcccaatgccatacacttttctcccttct
tatctcccctctggaggttatcgtgaacctcccacaccaacttccatcatctcttcaaat
ccctcccctcttcatgctcctgaaaccccttccccggccaaagaatactttgagaattac
gttgatcgtgttctcaaatctcaacctgtcccacctagtgagagtgaatctgagccatct
tcttctagaccaccctcaataacttcaacacctcatctttctcggactttggcaaggact
gctttgacacctgatgaatcaccggatgcacttaccggtccctcgccctcgaaaagaaga
aaacagggcagacaggtagactcgcaatcaccttctgtacgattgagtcttggttcaaag
ggatttcccattggtaatccgccaaaacctaggaagtcaagagacgaaacaccgacacca
acacaagcaagggtgaaatcggtttcgataagtccgtcgcaagtacaagtggttattcct
acccggaaatcctcactcagcatccaagatgaggaagagtctgatgaggatgaattggat
tggggtgagactgaaaaggacgaagattgggtgatgagagacaacgatgagatgtataga
cctcaaacacccgagtatcgtgcgacacctcctatgggtagtggaaggacaggcgagaga
gatacaaggactaatctgcaaagattacaaaccctttgtgaggatatctttgaagaagcc
gataatttcccagcagagatctcaactgaagatgtcggtggtagccaattcttctctgct
atatcgaaggaaggtgacgccgcgctgctctcggcagcctctatggataagctcattcga
tatgtttcccgcgtccaagggacaagaagaaagttcaagcattctgatgagctcctacag
ctcgaggttgaagtgatcaagagacttttccgattgttggaacgccgacttcgtgaagtg
gaagacatcgtgatatttccagatgacgtcagtgccaacatgaaggccaaaggtaaaggg
ggcaaagcgaagaggggcaaaaagtcctccaagtcaccagagaaagatgtaaacgacacc
atgccagactcgcaacagagcaccaatcgcgcttcacccacttctgatgaaatgatgaca
tcggaacgactggacaaactcggccacgatctgaagctcatagaagcgggcggattggca
gctcagtgctgtttgctgatcctggacagcgagggattgcccaaaccactatactcggag
gacatgatctccgctagtatacgggttgtaaaagatcagatcactaaggtcatcttacct
ctcgttcatggtctcgcaggtggcaaatcgtcttctcgtgctctgtcacatgtagtagac
gaggaattacaattagcgaagaagagcaagaacaaaaccatatcgccgttcttccaaaat
cctgtcctattggtcatcgcccagtccgccagtaccaccctaaggcatctcagctccatg
atgagtcgtcctgacctgtcatttccggatactcttgtcatacagaatgtttatctgtct
atcgaaccgctcttcgccgccgatccggtcaacgtaaccaaaaagaaagggagagaatca
ggtaaggacgtcggagtgtcaatcatgaagactctacggacagaggcgcttggttgtcta
cgtggggcttttgccaaatacgaaggtcaaagacagtggatcatagaagagattcttggt
tctctggcgaaagttcccgaacaaaacgcttcacaggctcggtttcaattgtctgacgga
agttcgatcagtacgacctcggctttactcttacagctcatacaagcttccaccttcgtt
gttatttcacagatacgcagacttagaaccaccgttgtcgacatgaacagctcgtcttct
tcccttgtaccgacagacacatccgacgaggagcttcgtctattaacggatgcgatggac
gcatcagtgaaatcagcccgggtggtggcatcttacttggtgcagaggtctagtactgcg
aaagccaccaaaacatctcgagataccgactacaaggtcgtccttgagacatttgtcaaa
gatctgttagaggtactatatcgaccggaatggccagcggcctcattgtacatcagccta
atatctcgactgatgcgtatcgctgacgtgctgacttctgtcgtggaagagcagaaaggg
ggcaacgaaacttcgacggcaagaagcatcgctcttgatcacttgggcgacatcgctgct
cgtctcagggaaatgcacctcaagatgaaggcagggcacaacgtcccatcgactgatgat
ctcatctcaaacccttctgccgacggatgcacctctctgctcaaggcgcaacacctgatt
gcttcctttttgtccacggctgctggagaggacgctatgttctccggtgctcgtgacatg
tcttccatcatctgggctcaagagctccatgcagccatcagcaagggtacatctgtcgtc
gaaaaagtggcaaaagaaaagggggaggaagctgaggaaactcgagaacagctccaggta
atcatccaggcactacgatcagcgctcctgaatgtttggaattcagacgagaatgtgttt
gggacgagcgatcctcaaatcggtgaacatgctgtttcagctgctgttgccatcgctcga
ggaaggtcgttgcaaaatgctttcgaacccatacttcacgccatcatcagtgccatggac
agccccgccgtggcccaccgtcagaaggctttgaggggtatcagcagtgttgtcactgtt
gatcctgacatcttaggtctcgtacatgtcagacatgccattgaagacagattatcagac
ggctcacccgctgtgagggacgcagcagtggaattagtcggcaagtatatcgtccagcaa
cctcagcttgcagttgagtattatcctcagattgcgttgcgtgtcaatgattcgggacta
ggtgtaaggaagagagttataaaactccttcgcggtatattttcttcggtcgaagatcga
gtcgtccgtgtggatatttgttgcaagttggtaggcgcaatggcagatacagatgacact
gttcaagatatggccttgaaaggattgatggagatattgtatcctcaaggaggaaatgtg
cactccgctttactcttggtggagattattggcgagtttcaaggtagtgacacgctgctg
aagaaggctcttcaaggaatcataaaggaatgtgagaagacttccaggactgcgagcatt
caagagacggtggaggttctaatccgtcaattggtagatgctactgagcaagcggacttt
gatgccctcagtcatatccgagccatacatttgctgtgcgccagtttacccgcgttgatc
gataccaaccaagccaccgtattgctctcgtacttacgtccgcctgccaatacggacgag
caagccacaaatgatgaacttctacgcatattccaaaagtgtataccccatatgccgcgc
acggcttcgacgttcgcgaccgacctagtgaaagctttgctacccatgatcagcaaaccc
gccggtggtttccaagcattgaaagagaccataggatgcttttgcgttgttaccacatgt
cttactcgtgactatacccgtcttattgcagtcctccgagcgtgtgaaaacaagatccga
gcattccacaaggcgctcaaagatggacaaacccccaatgttcaggccgcggctatgatg
ctgtacatcaccgctcttatcgccgagcattgtaatctggatcaagtcgccgtcaccaat
gagagcgtcaaaacggagcttgttaagatcacagatggtttactctatgaatatctcttc
tatctgtatctccaatttactcatcttccaattcctcaaacggcgcccagtatctgtctc
ggctgtttgttccatacttatcctgctttggtactgcgtgacgaagccctagattggatg
aaccaagtgttctcgtcacccgacatggataaccgggctcgacttctgggcgtgatacat
gatttcctatcgtctgaagtggagaagaaaacagctggtcaaggaaacaaagatctcaca
gcgttgataggaagtgctacagatctttctgagtcaggtgtttcgacagcagtcttacaa
cgtaatattgaacatatcctctcaggagcgaaatctcaacatccccccactcagaactct
gctttggacgtattggcattcacagttaatcaagggctatatcatccccttcagtgttta
cccatcctcatctccctagaaacttccatagagcctaacgtagccgaccgcgcactcgac
ctccatgctacacttcaccagaaacattcaacattggtcaatgtcagatatctggatttc
gcaaaggaatcatatgactatcaaaggtctatgtcgtctgaagtatgtggacatcggaat
ggggtggcattgttggctccgtggtttgggttgcctgacgtcggtttcatcctttacatc
tcggagaacctcgctacattggaatacaaactccaagaagaaataatcacgatcatccaa
tctctttcaaatataatttccacttctcataatctatctgaattactagaatctggtcaa
ctagacccatcttcgtctcccatcgaagagatctcaaacaaagaatgggtatcagaagta
ggggaaagaaaccccgctggcgtcatcatcgattgtagcatagtggtttctttagccatc
atgaccaagaaccatctgcttgatttgtattcattagcagaagacaaatgtttgaaacat
actttaggtaagaagactgctttgggtgataaacccgcgattaagaaaggtcctacgggt
ttggatctgagtgtagatcctctggtcaggggagtcggtacggttgaagaatttgaaatg
cagcgtcaaacttttatgagactggtccgagatgaaggtttggaagatctttaa
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integrated database retrieval system