Tremella mesenterica: TREMEDRAFT_60073
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Entry
TREMEDRAFT_60073 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
tms
Tremella mesenterica
Pathway
tms03013
Nucleocytoplasmic transport
tms03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TREMEDRAFT_60073
03015 mRNA surveillance pathway
TREMEDRAFT_60073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_60073
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TREMEDRAFT_60073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
18494961
NCBI-ProteinID:
XP_007002702
JGI:
Treme1_60073
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MPVNLLRALHRRRGKMKFALDSDSDSGSISSSETDSPSVKSTSSKHDSTSQIPNPMSELG
RRIREATLEPESDDDHPRVVRRDSYDSENEAADLLDVASEVSSVSESDEEPVKQVIPPMI
RNVPAEQGVSHHASSAASKQTMTMSTSRSLHDLVTRKTGVATLRDESTQPSPPELFARRI
ELEALLSSLDTNGQMLINKRMALIRRAVSEEPTVTPDSAWLAKQEMKREQDEIARLMQAM
TVEKKERAGALKNKISGLWSSIDVAVSARTKQATEAQHRAETAKKLEEEKKQAEAQRAAQ
VVKKAEEEKRAAKEAAERRAREEADLKREAENKAAEEQRRQAEIRKKEQEAAITTTAASP
TQTPERAALVTAVTQENQRTRTMVHQRRGSADFYRWRLEQDYIKKNIHQPVKTNPALKGS
LFKIAAKMRRFVGQVTNKKSVIVRVTGDIHKILCEQLGRETSAANPAIYKSDLPVAYLYM
TSRLAKCLIEQAEAEVSVKADAAFPVAWVVLGLLIRGHASFGPILFSRLAKKCPWVVPHL
PRPDSSDPAAIRKAAGFDVNETTSSFVERMTGICTFYFAILQTSLTPLISTLPIPPTPQQ
LLDLVIPEFRLPRAWTWLRSILQPRTIQHHPVSSLIAAWLNVCGAEVMRTYGPAQTGKLL
NLVRDKASLLGAESTASRERVHMLLDECARKGSVEGHPRKMWE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttaatctattgcgagctttacatcgccggagaggcaaaatgaagtttgccctg
gattcagattcggattcgggttccatctcaagttcggagacggactctccctctgtcaag
agtacatctagtaaacatgactctacctctcagattccaaatcccatgtcagagttgggt
agaaggatcagagaagctaccctggaaccagaatcagatgacgaccatccaagagtcgtc
agaagagattcgtatgattccgaaaatgaggctgccgacttgttggatgtagcgtcggaa
gtgtcaagtgtttccgagtcggatgaagaacccgtcaagcaagtcattccacctatgatc
cgcaatgttcctgcagaacaaggcgtgtctcaccatgcctcttcggcagcctcaaaacaa
actatgacaatgtctacttcaagaagtcttcatgacctcgtcaccagaaaaacgggtgtc
gccactttaagagacgaatctacccaaccaagtcctcccgaattatttgctcgtcggatt
gagcttgaggctctgttaagtagtcttgatacaaacggacaaatgttgatcaataaacgg
atggcgctgatccgtcgggccgtgtctgaagaacctaccgtaaccccagattctgcttgg
ctggcgaagcaggagatgaagagagagcaagatgagattgcgaggttgatgcaagctatg
acagttgagaagaaggaacgtgcgggggctctcaagaataaaatcagtggactttggtcg
tctatcgacgtagctgtgtccgctagaacaaagcaagctacagaagctcaacatcgagca
gaaaccgcgaagaagctggaagaggagaagaaacaggcggaagcacagcgtgctgcccaa
gtcgttaagaaagccgaagaggagaaacgagcagctaaagaggcagcggagaggcgagct
agggaagaggcggacttgaaacgggaggcggaaaataaggcagcggaggagcaaagaaga
caagcggaaataaggaagaaggagcaagaagctgctatcacaaccaccgccgcttctccc
acgcagacaccagaacgagcagcacttgtaaccgcagtcacacaggaaaaccagcgaaca
cgtactatggtccatcaacgtcggggctcggctgatttttaccgctggcgtcttgagcag
gactatatcaaaaagaatatacatcaacccgtcaagactaaccccgcgttgaaaggttcg
cttttcaagatagccgccaagatgcgtcgatttgtcggacaagtgaccaacaagaaaagt
gtgattgttcgagtgacgggcgatatacataaaatcctttgcgagcaactgggacgggaa
acgtcagcggccaacccagcgatttacaaaagcgatcttcccgtggcgtatctctacatg
accagtcgactggccaagtgtttgatcgaacaggccgaagctgaagtgagtgtcaaagcc
gacgctgccttccctgtggcgtgggtcgtcctcggtctattgatacgcggacatgcctcg
ttcggaccgatattattctccaggttggcgaagaaatgtccatgggtagttccccatctc
cccagaccagacagttccgatcctgcggcaatacgcaaagcggctggtttcgacgtgaat
gaaaccaccagctcgttcgttgaacgtatgacgggcatttgcacattctacttcgccata
ctgcaaacctccctcacgccattgatctccaccctccctatccctcctacgccacaacaa
ctccttgacctcgtcatccccgaattccgcttaccgagagcatggacatggcttcggtcc
attttacaacctcggacgattcaacatcacccggtttcaagtctcatagcggcatggctg
aacgtgtgtggcgcagaggtgatgcggacgtatggaccggcgcaaacgggaaagctgttg
aatttagtgagagataaggcgagtttattaggagcggaaagtacggcgagtagagaaagg
gtacatatgttgttagatgagtgtgcgaggaagggaagtgtggaaggtcatcctagaaaa
atgtgggagtga
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