Tremella mesenterica: TREMEDRAFT_60183
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Entry
TREMEDRAFT_60183 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
tms
Tremella mesenterica
Pathway
tms03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TREMEDRAFT_60183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_60183
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TREMEDRAFT_60183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
18495001
NCBI-ProteinID:
XP_007002742
JGI:
Treme1_60183
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MSFSFGNTQNQNQNQPQAFGSGSTSAPNTIKPFSFTTPNPQSSASPFGVKIDNPAPASSF
SFGTSQNQNQTQNQQSNTGFGSTQNQSTGGFNFGTNNQNAQPQQGIFGSNTAQQGQQNNT
FGFKPLGNLGASQNQGNTFGSQNQAQQGGFGSINQPSQQHGGFGSSQPFQSQQQQQQPQQ
QQPQPQNGFGTAGNALGQSIIGPRQELGIEERMLAVQRAWDVTSPDCRFQYFFYNVVDPG
TAPQYGRPAGATDDQKWARAMRDNPDPQNMVPVLATGWADVKKRVQMQEQVASVHQQKLK
EISAALANLTRQASLSSSIRLQTLQTSLKSLQSRLIHLAAQSPQFIPALHSTPFRPEETI
IRSTLENVQAELDGRSTLSSVPGTPGTPRSVGLRSEALGGKKGKRRMIGEVNELWGLLDE
VRRQRKLRQIGGGAEWTKDEKSLAQLAEVLGAQQTALAKLSGLVGDALFDADVIKGGLER
VRNDERMA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctctttcggaaacacccaaaaccaaaaccagaaccaaccccaagcgtttgga
tcaggttcaacatcagcaccaaacaccatcaaacctttctcattcaccacacccaaccca
caatcctccgcatctccattcggagtcaaaatcgataatccagctccagcatcttctttc
agctttggaacctctcaaaatcaaaatcagactcagaaccaacagtccaatacaggtttc
ggatccacacagaaccaatctaccggagggttcaatttcggtacaaataatcagaatgct
caacctcaacaagggatattcggatctaacacggcacaacaaggtcaacagaataatacg
tttggttttaaacctcttggaaatctcggtgcgagtcagaatcaagggaatacgttcggg
agtcagaatcaagctcaacaaggagggtttggatccatcaatcaaccatctcaacaacat
ggcgggtttggttcttcacaaccatttcagtctcaacagcaacaacaacaacctcagcag
cagcagccgcagccgcaaaacggttttggtactgcgggtaacgcgctgggtcagagcata
ataggaccacgtcaggaattggggatagaagagagaatgttggccgttcaaagagcttgg
gatgtgacttctccagattgtcgttttcagtactttttctacaatgtcgtcgatccagga
acagcacctcaatatggtcgaccagctggcgctacagatgaccagaaatgggctagggcg
atgagagataacccagacccgcaaaacatggtccccgtcttagcaaccggatgggccgac
gtgaagaaaagggtacaaatgcaagaacaagtcgccagtgtgcatcaacaaaagctcaaa
gaaatatcagccgcccttgcgaatttaactcgacaagcatctctatcatcttcgatccgt
cttcaaacccttcagacttctctcaaatctcttcagtcccgtctgatccatctcgccgct
caatctccccagttcatccctgctctacattcgacacctttcagacctgaagaaactatc
atccgctctaccctcgaaaacgtccaagctgaactggacgggcgatccactctctcttcc
gttccaggaacccctgggacacctcgatctgtgggtcttcgctcagaagctttgggggga
aagaaaggtaaacgtcgtatgataggagaggttaatgagctgtggggtctgttggacgaa
gtgcgtcgacaaagaaagttgagacagattggaggcggggcggaatggaccaaagatgag
aagtctttggcgcaacttgcagaggtgttaggggcgcaacaaacggcgttggcgaagttg
tctgggttagtgggggatgcccttttcgatgcggatgtgatcaagggagggttagagagg
gttcgtaatgatgagagaatggcgtag
DBGET
integrated database retrieval system