Tremella mesenterica: TREMEDRAFT_60273
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Entry
TREMEDRAFT_60273 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tms
Tremella mesenterica
Pathway
tms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TREMEDRAFT_60273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_60273
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TREMEDRAFT_60273
mRNA degradation factors
5'-3' decay
Lsm complex
TREMEDRAFT_60273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
18495025
NCBI-ProteinID:
XP_007002766
JGI:
Treme1_60273
LinkDB
All DBs
Position
Unknown
AA seq
135 aa
AA seq
DB search
MEALIPFTTSGSLVDLVDKKVLVILRDGRKIIGVFRSYDQFANFLMESVVERLYHKMEYA
DRDIGILLVRGENVVAVGEIDLIAEDLIPLRETSVENIMTRITEENTKRDKDQIIKENVL
REYGFVSEGREGDAY
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttgataccatttaccacctctggttctctggtcgatctcgtcgataagaaa
gtattggtcattttaagagatggaagaaagattattggagtgtttaggagttatgatcaa
tttgcaaactttttaatggaaagtgtggtagaaagattatatcacaaaatggaatatgcc
gatagagatataggtatattgctagtgagaggagagaacgtagtggccgtaggagagatc
gatctaatagccgaagatttaatccctttaagagaaactagcgtcgagaacataatgacc
agaataacagaagagaatacgaaaagagataaagatcaaattataaaagaaaacgttttg
agggaatatggttttgttagtgaaggtagagaaggggatgcttattag
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