Tremella mesenterica: TREMEDRAFT_61328
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Entry
TREMEDRAFT_61328 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
tms
Tremella mesenterica
Pathway
tms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TREMEDRAFT_61328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_61328
Enzymes [BR:
tms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
TREMEDRAFT_61328
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TREMEDRAFT_61328
Prokaryotic type
TREMEDRAFT_61328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
18495430
NCBI-ProteinID:
XP_007003607
JGI:
Treme1_61328
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MSLPDSPNSHTSVYSISSGSSYTPEKPSASRPNTEPRARRRTINHGISSHNEERGKRKTI
ESDSLPSNKSHTTKSTTCITSHHDEGRGKRKSSVLVQSTSKRKKSTSCKLSNTHEGDEDL
QDLENKRRHTKEYHGVRDVKDMQREVLDWFDLVRSCPGGYRGSKRSMACVFDNPWFIPSH
TGGLGYYRRARSLLAGAKSVVAKFDGKLPEDPQVLEKEVEGVGRYTAGAITSMAYGVRTP
IVDGNIHRLLTRLLAVHAPQTTPATLKFLWAAADDLVQGLPQEEGVAGNWNQALMELGSQ
VCKPVNPDCAVCPLKSVCNAYAELSSTPPTPRPDEKTCTLCVPIPDSNGGNIPSVTIFPM
RKDKKVSREEEEVVSIVEWSGLGERRWLLVKRPETGLLAGLYEPPSCSIPPGSSVEDRHS
IAVEHLRSIIDLTGTTMTQVPVDISLKDPMMKNENLSMGKTVARVSEGHAECPAVKTSDR
SVLWLDEKGVEGANVSTGVKKVWAAAFGQWGCFSSSGPETQSGKRKKVKSKIGTKRDEMI
SKEKVKIVRKVMMPLMPKEV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccctgactctcccaactcccacacttcggtatattctatctcctccggctca
tcatacacccccgaaaaaccttctgcaagtcgtcccaataccgaacctcgagcaagaaga
cggacgatcaatcatggcatctcttctcataatgaagaacgagggaaaagaaaaacgatc
gaatccgactctttgcccagtaataaaagccacacgacaaaatcgaccacatgcattact
tcacatcatgatgaaggacgaggaaagaggaaatcgagcgtattggtccaatccacctcc
aagaggaagaaatcgaccagctgtaaattatcaaacacacacgaaggagatgaagatctg
caggatctggagaataagaggagacatacgaaggagtatcatggtgttagagatgtgaaa
gatatgcagagagaggtattggattggtttgatctggtaagatcttgcccaggcggatat
cgaggaagtaaacgcagcatggcgtgcgtatttgacaatccttggttcataccctcacac
acaggaggcttggggtactatcgtcgagctaggagtttattggccggggcgaaatctgtc
gttgctaaatttgatggtaaacttccagaagaccctcaagtgttagagaaagaagtagaa
ggtgttggacgttatacagccggagctatcacttccatggcgtacggagttcggacacct
atagttgatggtaacatacatcgtcttctcactcgtctccttgctgttcacgcccctcaa
accaccccggctactctgaaattcctctgggcagcagcggatgatctcgttcaaggctta
cctcaagaagaaggtgtggctggaaattggaaccaagctttgatggaactcggtagtcaa
gtttgtaaacctgtcaatccggattgtgcggtttgtccattgaaaagtgtttgtaatgca
tatgccgaactttcttcaacaccgccaacacctcgacctgatgagaaaacatgtactctc
tgtgtacccatacctgactcgaatggaggaaatatacccagtgtgacgatatttcccatg
cggaaagataagaaggtatctagagaagaagaagaggttgtgagcattgtagaatggtct
ggtttgggtgaacggagatggttattggtcaagagaccagagaccggtcttctagcgggg
ttgtacgaacccccttcttgttccatacctcctggttccagtgtagaagatcgacattcc
atcgctgtggaacatcttcgtagtatcatcgatttgaccgggacgacaatgactcaagta
ccagtggacatatctttgaaggatccaatgatgaaaaatgagaatttgtcaatgggaaag
acggttgctcgagtctcagaaggacacgcggaatgtccagcggtgaaaacgtcggataga
tccgttctatggttagatgagaaaggagttgaaggtgccaacgttagtactggagtgaag
aaagtctgggcggcggcatttggtcaatggggttgtttctcttcttctggtcccgagaca
caaagtggaaagaggaagaaagtgaagtcgaagattggaacgaagagggatgagatgatt
tcaaaggagaaggtgaagattgtgagaaaagtcatgatgcctcttatgcccaaagaagta
tga
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