Tremella mesenterica: TREMEDRAFT_62305
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Entry
TREMEDRAFT_62305 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K06636
structural maintenance of chromosome 1
Organism
tms
Tremella mesenterica
Pathway
tms04111
Cell cycle - yeast
tms04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TREMEDRAFT_62305
04113 Meiosis - yeast
TREMEDRAFT_62305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_62305
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
TREMEDRAFT_62305
Meiosis-specific proteins
Cohesin complex and associated proteins
TREMEDRAFT_62305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
Laminin_I
Val_tRNA-synt_C
TolA_bind_tri
Filament
OmpH
DUF1664
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18495833
NCBI-ProteinID:
XP_007004662
JGI:
Treme1_62305
LinkDB
All DBs
Position
Unknown
AA seq
1228 aa
AA seq
DB search
MPLKRLELSNFKSYRGQQVIDFGDAPFMCIIGPNGAGKSNLMDAISFVLGVKSAQLRSTQ
LKDLVYRGRKAAQAEDETMSIEDDGDSQAHSNDARTAYVMAVYEDDKNKEWRFRRSITTT
GASTYYLNGKAVPWNLYNQQLEKFNILVKAKNFLVFQGDVEGVASQDSKALAKLIDRISG
WALSRLGSLDLAPAYEASKAAQEKATDASTANYAKKRTMLTEVRHFKEQREEIKQWEKLR
DEKDALVQRHLLWRLYHLTEEINESTKQVEEANEKLTDLRAAVNDNDSKFRLAKKDQNQA
LLNVKKREAGVKRAEKAYDDKRQSDSLETLQRGAADVKKSMAEAVERQRKASQAKGKTLS
AADLAEYRTLRSAANLRAVSERQQLESLHREQKNLRDALASAEDKIQQAERRKTKLTEEV
NSLSSREVSMSDKLAELNDERERLKAQLEHAQAERERVNMKVTEINEKLQETYNKLLQAG
VDKRESEREAKLKEVLQSLKRVFPGVHGRVVDLCKPTARKYDTAVMTVLGRHIDAVVVEQ
EKVAIDCIEYMRNQRAGQATFIPLDTIQVKPVAERLRNFARGARLAFDCIEYEPAVERAM
QHVCGNAMICDSMDIAKQICYDKGQEVKAVTLEGTVIHRSGLITGGQGSGGSRKFDDREV
QGLQRLKEQYLQQLQDLNRAKPKDNADEGVLENLARLDAEATIAKDDLVRVFFKRQKFQA
DAQDATRLRLNGLRAELNHVESDFKKLSPDLEKRSRAVRTLEQKTADLAKTVNTADDETF
DAFCKKIKISHIQEYEDVQLKLATEESEALEAFTTQQARINHQIEFETSQLSATRERLAS
LRATIDRENHNVDKLRSSKRALEKELDQLQAEIEHQRGKLSNAQAAYDKATDLVEEMRDA
TRKTQRMLDKVLKEIGGWNDEIEKASSDRHAIYRRCRLEEIDLPLIRGSLDKVPIEENLQ
KDGESMDVDDDGTQRPARSNDYGIEPDFDVLEDEDRENDAEELGHNFEAQIAALKANLDK
MIPNMKAIDRLADVQTGLDEAEREAEETRQESKRAREEYQQLRKKRCDLFNKAYNHMTGC
IDKIYKDLTKSKTFPTGGVGFLSLEDAEEPYLSGVKYNVMPPGKRFAEMDQLSGGEKTMA
ALALLFAIHSFHPAPFFVLDEVDAALDPTNVSKLARYVREQAEKEVQFLIISLKTTLYEH
ADGLVGVYREQEENSSKTLTLDLRNYVE
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaaaaggctggagctgtcaaacttcaagtcgtatagaggacagcaggtgatc
gatttcggagatgcacccttcatgtgcatcatcggacccaacggtgctggcaagtccaac
ctcatggacgccatctccttcgttttgggtgtcaaatcggcccaactcaggtccactcaa
ctcaaggatctcgtctatcgtgggaggaaggccgctcaagctgaggacgaaaccatgagt
atagaagacgatggagattctcaagcgcactccaatgatgcccggacggcatacgtcatg
gccgtctacgaggacgacaaaaataaggaatggagattcagacgcagtatcacaacaact
ggagcctccacttactacctgaatgggaaagccgttccttggaatctgtataatcagcag
ctcgaaaagttcaacatcctagtgaaggccaagaacttcctcgtctttcagggtgacgtg
gaaggcgtcgccagtcaagacagcaaggccttggccaagctcatcgacaggatcagcggg
tgggcactgtcacgtctcggttccctggacttggcacctgcctacgaagcctccaaagcg
gctcaggaaaaagcgactgatgctagcacagcaaactatgccaagaaacgaaccatgttg
accgaagtccgacacttcaaagaacagagggaagagatcaaacaatgggaaaagctgaga
gacgaaaaagatgccttggtgcagcggcatctcctttggcgtctctatcacctgaccgaa
gagattaacgagtccaccaagcaagtagaagaagccaacgaaaaattgacagatttacgt
gctgcagtgaatgacaatgacagcaaattccgcctcgccaagaaagaccagaatcaagcg
ttgttgaacgtaaagaagcgtgaggccggagtgaagagggccgagaaggcttatgacgac
aaacgccaatctgacagcctggagactctgcaaagaggtgcagcagatgtcaaaaagagc
atggctgaggctgtcgaacggcaaaggaaagctagtcaggcgaaagggaaaaccttgtcg
gcagctgatcttgccgagtataggaccctccggtctgcagccaaccttcgtgccgtatca
gaacgacagcaacttgagagtcttcatcgcgagcagaagaacctacgtgatgccctcgcc
tcggccgaggacaagattcaacaagctgaacgacgcaaaaccaaactgacagaagaagtg
aacagcttgtccagtagggaggtatcaatgtccgataagttagccgaactcaacgatgaa
agggagcgtctaaaagctcagttggaacatgctcaagctgaacgagagcgagtcaacatg
aaggtgaccgagatcaacgagaaactccaggaaacatacaacaagttgttacaggcaggg
gttgacaagcgtgaatcagagcgggaggccaagctgaaggaagtcttgcagagtctgaag
cgcgttttccccggagtgcacggtcgcgtcgtcgacctctgtaaacctacggctcgaaag
tacgacacagctgtcatgactgtcctagggcgacacatcgatgctgtggttgtggagcag
gagaaagtggccattgattgcatcgagtacatgcgcaaccaacgcgctggtcaagctacc
ttcattccgcttgacacgatccaagttaagcctgttgcggaacgactgcgaaattttgct
cgtggtgctcgtttggccttcgactgcatagagtatgaacccgcagttgagagggcgatg
cagcacgtctgtggcaacgctatgatttgcgactccatggacatcgccaagcagatttgt
tatgacaaaggccaagaggtcaaggcggtgactttggagggtacagtgatacacagaagt
ggtctgatcactggaggtcaaggatccggtggctctcgcaagttcgatgaccgggaggtt
caaggtcttcaacgactgaaagagcagtatcttcagcaattgcaggatctcaaccgtgcg
aagcccaaggataacgcggacgaaggggtgctagaaaacttggccagacttgatgccgag
gcgaccatcgcaaaggacgatcttgtaagggtgttcttcaagcggcagaaattccaagct
gacgctcaggacgcgactcgccttcggctgaatggtttacgagctgagctcaatcacgtg
gagtctgatttcaagaagctctcccctgatctggaaaaacggtctcgagcagttaggact
ctggaacaaaagactgccgatctcgccaaaacggtcaacactgcagacgacgaaacattt
gacgctttctgcaaaaagattaaaatcagccacatccaagaatatgaggatgtccaactg
aagttagcgacggaggagagtgaggcgctcgaggccttcacgacccagcaggctcgcatc
aatcatcaaatcgaattcgagacatcacaattatctgcgactcgtgaacgtcttgcctca
ttgcgggccactatcgaccgcgagaatcataacgtcgataaattgcgttcttcgaagaga
gctctcgagaaagaactcgatcaactgcaggctgagattgaacaccagcgaggcaagctc
tccaatgctcaggctgcatatgacaaagctaccgatctggtcgaggaaatgcgcgatgct
accagaaagactcagcggatgctcgacaaagtgctcaaggagattggagggtggaacgac
gagattgaaaaggcatcctcagatcggcatgccatttatcgtcgttgtcggcttgaagag
atcgatcttccgcttattcgcggctcgctcgataaagttcctatcgaggagaatctgcaa
aaggatggagagtccatggacgtggatgacgacgggacccaacgtccagcaaggagcaac
gactacggtatcgaacccgacttcgacgtgctggaggacgaggacagggagaacgacgct
gaagagctgggccacaattttgaggcgcaaattgcggcactgaaggccaatctggataag
atgattcctaacatgaaagccatcgatcggcttgccgacgttcaaaccgggctggatgag
gcggaaagagaagccgaggagactcgacaagagagcaaacgggccagagaagaatatcag
caattacgcaagaagcgctgtgacctcttcaataaggcatacaatcacatgactgggtgt
atcgacaagatttacaaggatctcactaaaagtaagacatttcccaccggaggtgtcggc
tttctcagtctcgaagacgccgaggaaccttatctctctggcgtcaagtacaacgtcatg
cctcctggcaaacgattcgctgagatggatcagttatcaggaggtgagaaaacgatggcc
gcgttggccttgttatttgccattcattcctttcacccggctccgttcttcgtgctcgac
gaggtggacgccgcgttggacccgacgaacgtgtccaagctggcgcgatacgttagggag
caagcggagaaggaagtgcagtttctgatcatctcgttaaagaccacactatacgaacac
gcggatggcttagtgggggtttatcgagagcaagaagagaactcgtccaagacgttgact
cttgatctccggaactacgtggaatga
DBGET
integrated database retrieval system