Tremella mesenterica: TREMEDRAFT_62628
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Entry
TREMEDRAFT_62628 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tms01009
]
TREMEDRAFT_62628
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_62628
Protein phosphatases and associated proteins [BR:
tms01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
TREMEDRAFT_62628
Membrane trafficking [BR:
tms04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
TREMEDRAFT_62628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
WsaF_C
EXOC6_Sec15_N
Cluap1
L_thumb_ring_vir
Motif
Other DBs
NCBI-GeneID:
18495959
NCBI-ProteinID:
XP_007005043
JGI:
Treme1_62628
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MSSSPSPFRPPLPASPALPSPPPSESFFSELDGTASVLEHSALDFGWDDSRIDPKSLNLV
SWKLGIDFNVQDDINKRGFNAISTVLNHPTKKANPLRGSRKPLPPLRDPPPILPKPPPPS
AYDPYLQTVTPLYDTLINAQASSSSSSGGEYDLQQPGRPDLPSLSSVPELFFDPDFDLGK
PSTWEEVVGNAGPALKSRFSDNLDVLENHLVHEITQRSASFFSALSNLQDLQSESSTCLS
RIAELQEALREVGDKQARKGLEIIDAQEELRILRTVEQNVKQIGDLNDMLNRARNVVADG
DWATGLNQIGDIVNWWERHGVGEKGDFQSSLPSPTEVKSTSPPVSQSLPLSSLASLSTLP
ATVSEITSQISVLLEAALTAQLLAMLSTVEETPEFDKDAFKMCMEPLIGGLVRCGTPEAL
SKLWREVVITSIRDASRKHLPLLQSDEEVGEDGKIDIKGTSLVGALKTMDHNRFLLLTVQ
INSASLSRLERVQIMGELLQEVLTATCSLSPLTISNRTLDVTASLKTNPTPSLHPLEILT
AGCEVANARASKILASRSDQHASLSLEEFVELFQINWEFILATETLAKRMIVPLRGVTAT
QARAFLVAYHAVRLTKSAKSVEDELWTQIDVPPSLQHIVDLLVQSAVSDPPECNIPPPPA
ITNGAAGPQKTLSIEERNFFVVRATMETLELLEDYLKIVINLELVVTDVMSRIVEFLKSF
NSRTCQVVLGAGAMRSAGLKNITAKHLALASQSLSVVVALIPYIREFVRRHLSPKQAVML
TEFDKLKRDFQEHQNEIHAKLVAIMSDRLAVHCASLRDIDWESTSEKNGPSLYAELLVKE
TATLHKVLSKYLPAQTVESVMSEVLGAIVYRVGEEYKKVELKSEEAKRRMLQDATLITQR
LSPLCSTDKTVTILETLVKDKPTPRKMSQTMAGLLRRRGSSSVKPAPASLEKEESIVDPG
EDEEHALEDPPDLPEETPVVVNGETSQVSKEDSQPLDPVEQVETTEPANPPDPPDRGEQT
GQTQEETSEVLDVREEQVDTGPATPPKETDKAPAVPSKLVGGDRLDETQEGEVENLDQSQ
DELEDPIQADGEKEREGKDGEESESGPRVPDKD
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctccccttcaccttttcgacctccgctacctgcctcccccgcactcccatca
cctccaccttccgaatcgttcttttcagagctcgacgggaccgcaagcgtgctggaacac
tctgctctcgactttggctgggacgattcgagaatagatcccaagtctctcaatctggtg
tcttggaaactcggcatagatttcaacgtccaagatgatatcaacaagcgaggctttaat
gccatatccacagtcttgaatcatcccactaaaaaggcgaaccctcttcgtggttcacgc
aaaccccttccccctctgagagatcccccgccgattttgcccaaaccaccaccaccgtca
gcctacgacccgtacctgcaaaccgtgactcctctgtatgacaccttgattaatgcccaa
gcatcatcatcttcctcttcggggggtgaatatgaccttcaacaacccggtagacctgac
ttgccctctctctcctctgtgcccgagctcttcttcgaccctgactttgatctcggcaag
ccctccacgtgggaagaagttgtgggaaacgctgggccagctctcaaaagtcggttttcg
gacaacctcgacgttttggagaaccatctggtccacgagatcacccaacgctccgcttca
ttcttctccgcactcagcaatttacaagacctgcagtccgaatcgtccacatgtttgtct
cgtatcgcggaactgcaggaggccctgcgggaagtgggggacaagcaagccagaaaaggt
ttggagataattgacgcccaggaggagttgcggatactgagaacggtggagcaaaatgtg
aaacagattggggacctgaacgacatgctgaatagggcccggaatgtggttgccgatgga
gactgggcgacgggtttgaatcaaatcggggacattgtcaactggtgggagcggcatggc
gttggcgagaagggagattttcagtcatccctaccgtcaccgaccgaggtcaaatctaca
tcaccgcccgtttctcagtctttaccactgtcatcgttggcgtcattatcgaccttaccc
gctactgtatcagaaattacctcccaaatctcagtcctgctggaagcagcccttacagcg
cagctgctggctatgctgtctacggtggaagagaccccagaatttgacaaagacgcgttc
aagatgtgtatggagccgctcatcggcggattggttcggtgtggtacccctgaagctctg
tcaaaattatggcgagaagtcgtcatcacttccatacgcgatgcctcacgcaagcatttg
ccccttctacagtccgacgaggaagtaggggaggatggtaaaatagatatcaaagggact
tcattagtgggagcacttaagacgatggaccacaaccgtttcttactcctcaccgtgcag
ataaactcggcatccttgtcacgcttggagagagtgcaaatcatgggggagctgcttcaa
gaggtccttacggctacatgttctctttcccctctgacaatatccaatcgtacactcgat
gtcactgcctccctcaaaacgaaccctacgccttcccttcaccccctcgaaatcctgact
gccggctgtgaagtggcaaatgctcgagcctcaaaaatcctagcctcccgctcagatcaa
catgcctctttatccctcgaagaattcgtcgagctatttcagataaactgggaattcatc
ctcgccactgaaaccctggccaaacgcatgatcgtccctctgagaggtgtgacagcgacg
caagcgcgagcctttttggtcgcatatcacgctgtgcgtttaacaaaatctgcaaagtcg
gtagaggatgaattgtggactcagatcgatgttccaccatcactgcaacatattgttgat
cttctggtccaatcggcagtctcggatcctccagaatgtaacatcccacctcctccggct
atcacgaatggtgcggccggaccacagaaaactctcagtatcgaagaaaggaatttcttc
gtggtcagagccacgatggaaactctcgagcttctggaagattatctgaagatcgtcatc
aacctcgagttggtggtgacggacgtcatgtctcgtattgttgagtttctcaagtccttc
aattcgagaacatgccaagtagtgttgggcgcaggggcgatgcgatcagcagggttgaag
aacattacagcaaagcatttggctttggcgtcacaatctctatcggtcgtcgtggctttg
ataccttacatccgggagttcgtgagacgacatttgtccccaaagcaggcggtcatgttg
actgaatttgataagctcaaacgggatttccaagaacatcaaaatgagattcatgccaaa
ttggttgcaatcatgtcagaccgattagcagtgcattgtgcatcccttcgagacattgac
tgggagtcgacttcggagaaaaatggacctagtctatacgccgaactactggtcaaggag
actgccacactgcacaaggtcttgtcgaagtatctgcccgcgcaaacggttgagagcgtc
atgtcagaagtcttgggtgctatcgtatatcgggtcggggaggagtacaagaaggtggag
ttgaagagcgaagaagctaagagacggatgttgcaggatgctaccctcatcacacaacgt
ctctccccactctgttcgaccgataaaaccgttaccatcctcgaaacactcgtcaaagat
aaacctacacctcggaagatgtcgcaaaccatggcgggtctattacggcgaagaggatcg
agcagtgtgaagcctgcccctgcgtctcttgagaaggaagagtcaattgtcgatcctggc
gaggatgaagagcacgctttggaggacccaccagacttaccagaggaaacaccggttgtt
gtgaatggcgagacatcgcaagtgtccaaggaggactcacagccactagatccggtggag
caggtcgaaaccacggaaccggcgaaccctccagatccgcccgatcgaggagaacaaact
ggccagacgcaagaagagacaagtgaagtgcttgatgttagagaggagcaagtggacaca
gggccagccactccgcccaaggagaccgacaaagctcctgctgtaccatcgaagttggtt
ggtggggacagactcgacgagacgcaggagggggaggtagaaaatcttgatcagagccaa
gacgaactggaggatccaatacaggcagatggggagaaggagagagaaggaaaagacggt
gaggaatccgagtctggaccacgtgtgccagataaggactaa
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integrated database retrieval system
