Tremella mesenterica: TREMEDRAFT_62821
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Entry
TREMEDRAFT_62821 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03505
DNA polymerase delta subunit 4
Organism
tms
Tremella mesenterica
Pathway
tms03030
DNA replication
tms03410
Base excision repair
tms03420
Nucleotide excision repair
tms03430
Mismatch repair
tms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TREMEDRAFT_62821
03410 Base excision repair
TREMEDRAFT_62821
03420 Nucleotide excision repair
TREMEDRAFT_62821
03430 Mismatch repair
TREMEDRAFT_62821
03440 Homologous recombination
TREMEDRAFT_62821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tms03032
]
TREMEDRAFT_62821
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_62821
DNA replication proteins [BR:
tms03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
TREMEDRAFT_62821
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
TREMEDRAFT_62821
MMR (mismatch excision repair)
DNA polymerase delta complex
TREMEDRAFT_62821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_delta_4
Motif
Other DBs
NCBI-GeneID:
18496031
NCBI-ProteinID:
XP_007005115
JGI:
Treme1_62821
LinkDB
All DBs
Position
Unknown
AA seq
209 aa
AA seq
DB search
MPPRKSKTKSTAGLAQPTLNFRSKGPDTYRPKKPSLLRHSVSAASIGSAGSEHVDEDVSG
EGKAGQSVMRGKSQTGVKGESQVLGDGKGSEKESQVVIENRGNQFEQQEKTKMLNVKSKE
WDDIWESAVEEMGGMEPIHATEDNKIHHILRVFDMTSKYGPCVGMTRLQRWERANKWGLN
PAPEIRAILTTMQGVEDPTYRENVLYTWL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgccacctaggaaatcaaagaccaaatcgactgctgggctggcccagccaactctaaac
ttccgttccaaaggtcctgatacttatagacccaaaaaaccttctttactaagacattca
gtttcggcagcttccataggatctgcagggtcagaacatgttgatgaggatgtttctggg
gaggggaaagcggggcagagcgtgatgagagggaagagtcagactggggtgaagggagaa
agtcaggtgttgggggatgggaaaggatcagagaaagaaagtcaagtcgtgattgaaaat
agaggaaaccaattcgaacaacaggaaaagacgaagatgttgaatgttaaaagtaaagaa
tgggatgatatctgggaatcggccgtagaagagatgggcggtatggaacctatccacgct
acggaagataacaaaatacatcacattctcagagtattcgacatgacttcgaaatacgga
ccatgtgtaggaatgaccagattgcagagatgggaaagggcgaataaatggggtttaaat
cctgctcccgagatccgagctatactcaccaccatgcaaggtgttgaagatcctacatac
agagaaaacgtgttgtacacgtggttgtga
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