KEGG   Tremella mesenterica: TREMEDRAFT_62821
Entry
TREMEDRAFT_62821  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K03505  DNA polymerase delta subunit 4
Organism
tms  Tremella mesenterica
Pathway
tms03030  DNA replication
tms03410  Base excision repair
tms03420  Nucleotide excision repair
tms03430  Mismatch repair
tms03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TREMEDRAFT_62821
   03410 Base excision repair
    TREMEDRAFT_62821
   03420 Nucleotide excision repair
    TREMEDRAFT_62821
   03430 Mismatch repair
    TREMEDRAFT_62821
   03440 Homologous recombination
    TREMEDRAFT_62821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tms03032]
    TREMEDRAFT_62821
   03400 DNA repair and recombination proteins [BR:tms03400]
    TREMEDRAFT_62821
DNA replication proteins [BR:tms03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    TREMEDRAFT_62821
DNA repair and recombination proteins [BR:tms03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      TREMEDRAFT_62821
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     TREMEDRAFT_62821
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 18496031
NCBI-ProteinID: XP_007005115
JGI: Treme1_62821
LinkDB
Position
Unknown
AA seq 209 aa
MPPRKSKTKSTAGLAQPTLNFRSKGPDTYRPKKPSLLRHSVSAASIGSAGSEHVDEDVSG
EGKAGQSVMRGKSQTGVKGESQVLGDGKGSEKESQVVIENRGNQFEQQEKTKMLNVKSKE
WDDIWESAVEEMGGMEPIHATEDNKIHHILRVFDMTSKYGPCVGMTRLQRWERANKWGLN
PAPEIRAILTTMQGVEDPTYRENVLYTWL
NT seq 630 nt   +upstreamnt  +downstreamnt
atgccacctaggaaatcaaagaccaaatcgactgctgggctggcccagccaactctaaac
ttccgttccaaaggtcctgatacttatagacccaaaaaaccttctttactaagacattca
gtttcggcagcttccataggatctgcagggtcagaacatgttgatgaggatgtttctggg
gaggggaaagcggggcagagcgtgatgagagggaagagtcagactggggtgaagggagaa
agtcaggtgttgggggatgggaaaggatcagagaaagaaagtcaagtcgtgattgaaaat
agaggaaaccaattcgaacaacaggaaaagacgaagatgttgaatgttaaaagtaaagaa
tgggatgatatctgggaatcggccgtagaagagatgggcggtatggaacctatccacgct
acggaagataacaaaatacatcacattctcagagtattcgacatgacttcgaaatacgga
ccatgtgtaggaatgaccagattgcagagatgggaaagggcgaataaatggggtttaaat
cctgctcccgagatccgagctatactcaccaccatgcaaggtgttgaagatcctacatac
agagaaaacgtgttgtacacgtggttgtga

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