Tremella mesenterica: TREMEDRAFT_63629
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Entry
TREMEDRAFT_63629 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14545
ribosomal RNA-processing protein 7
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_63629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_63629
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TREMEDRAFT_63629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP7
RRM_Rrp7
SEEEED
RRM_1
Ssb-like_OB
Motif
Other DBs
NCBI-GeneID:
18496331
NCBI-ProteinID:
XP_007005853
JGI:
Treme1_63629
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MSPIPTSSPNLYSSFLPIPLLLSSCLPGVSSTFSTHYIYVRPNRPSHSKQSTQSTLADTT
SSDRTIFLCNLPVDMTDRHLRLIFQRWGVLESITLSSSSTGDILESVILADEEENFHSDS
DSDSDSASQSDHVESKDNNDVSKESKYHNDIDTTAEDEVKNKIPELTFINSNISRREKRR
KRQITKIPSIIPLPNPPRPFGKSGLRTAHITFLSNISLNRLFSSSPNPIQMNDYLSSSHH
TSIRSETRKELQKRKEEMEREDGDEVVLGLNHYLKRYNSSRPNLSLIKVHADSALDKYDH
LHSLLLSSRARKRGAGALVDDEGFTVVVRGGRHGRTGGEMGVGVVSQKGNLQKFERKKKL
EVVGEFYKFQRTDKRRQELAGLRKQFESDKARVEEMRNSKRLKPY
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgatcccgacgtcctcaccaaacctatactcttctttcctccccatccctctc
ctcctctcttcttgtctccccggcgtatcttcaaccttctcgacgcattatatctatgtc
agaccaaaccgaccctctcattcaaagcaatccacccaatccacccttgcagataccacc
tcatccgacagaacgatattcctatgtaacctcccagtagatatgaccgatagacatctt
cgattgatattccaacgatggggggtccttgaatctatcactttatcttcaagttctact
ggtgatattttagaaagtgtcattttggccgatgaagaagaaaattttcattccgattcc
gattctgattctgattctgcgtctcaatctgatcatgtggaatcaaaggacaataacgat
gtttcgaaggaatcaaaataccataacgatatcgataccactgcagaagatgaggtgaaa
aacaagatacccgaattaacattcataaactctaatatctctcgtcgtgaaaaacgtaga
aaacgacaaatcacaaaaataccttcaatcataccacttcctaatccacctcgtccattt
gggaaatcaggtttaagaacagcacacataacatttctttcgaacatttctcttaataga
ttattctcttcttctcccaatccaatccaaatgaacgattatctatcatcttctcaccat
acctctatacgctctgaaacaaggaaagaacttcagaaacgtaaggaagaaatggaaagg
gaagatggggatgaagtagtacttggattaaatcattatttgaaaagatataattcttca
agaccgaatttatcacttataaaagttcatgcggatagtgctttggataaatacgatcat
ttacattctcttttattatcttctcgtgcgaggaaaagaggagcaggagctttagttgat
gatgagggttttacggttgtcgttaggggtggtagacatggtaggactggaggtgaaatg
ggtgttggtgtagttagtcaaaaaggaaatttgcaaaagtttgaacggaagaagaaattg
gaagtagttggggaattttataagtttcaacgtactgataagagaagacaagaactagca
ggtcttcgaaaacaattcgaatcggataaagcgagagtggaagagatgagaaattctaaa
cgattaaaaccttattga
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