Tremella mesenterica: TREMEDRAFT_63752
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Entry
TREMEDRAFT_63752 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_63752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_63752
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_63752
03029 Mitochondrial biogenesis [BR:
tms03029
]
TREMEDRAFT_63752
Enzymes [BR:
tms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
TREMEDRAFT_63752
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
TREMEDRAFT_63752
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
TREMEDRAFT_63752
Mitochondrial biogenesis [BR:
tms03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
TREMEDRAFT_63752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
Motif
Other DBs
NCBI-GeneID:
18496379
NCBI-ProteinID:
XP_007006136
JGI:
Treme1_63752
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MSTTQPTLDVYRSLSRQIKKHLAPYVPTDQPPSIPSLLGIDPISYSSRLAGKTLPLATTV
SPIVSKSNVEFGDGSKLRVGQDKRKVLDGEKTEMGGIRRMKKRRGGIRKGREIPYEFLLP
LHYMHTHYLISLFSLPPLPSTFSHPQPSSSSNVGSSSNIPLIPAPSNPHFPNRPISSFTP
NNSASPHNKATPLKMIPSKEKNNPLPTGVSTETIQSKLVKADFTGAILLILSSRNPSLVG
IKGIVIEETYGTFLLVPIDGKVRVVPKKGSMFRFEFPAYAPSPENDFPTNTINSHLTTSS
KQTISHPSSSSFILDEGETSAMQRRMGNESTEQKKESAVAHGIEISVNESVEQTDIPWEQ
KQKALYQPPEADTMELHLSNINLPRIQIDILGDNFCHRSVDRAGRKFRPTQIPGSGWAEE
HVRLPVEEGFGDLIRKLEREERDSGQVKSLSSDRRNGKERSKVKVVGRRKRDKSRRKDPP
AWGKYEPFV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtccactactcaaccaacgttagacgtataccgttccctctcccgacaaatcaaaaaa
catttagctccttatgtacctacggatcaaccaccttctataccctctttactcggaata
gacccgatcagttattcttcccgattagcaggaaagactcttcctctcgcaactactgtc
tcacctatcgtttcgaaatctaatgtagaatttggtgatgggtcgaaattgagagtagga
caagataagaggaaggtgttggatggagagaagacggagatgggagggattaggaggatg
aagaaacgaagagggggtataagaaagggaagggagataccatacgaatttcttttaccc
cttcattacatgcacacacattatctcatttctctcttttcacttcctcctctcccatca
actttttctcacccccaaccttcttcttcctccaatgtgggatcttcatccaacatacct
ctcattccagctccatcaaaccctcattttcctaatcgacccatttccagttttaccccg
aacaactcggcgtcaccgcacaacaaagcgactccgcttaagatgataccttccaaggaa
aaaaataacccacttcccacaggcgtgtcaacagaaaccattcaatcaaaacttgtcaaa
gcggattttaccggtgccatactcttaatcctctcttcccgtaacccctctttggtgggt
ataaaggggatagtgattgaagagacttatggaacgtttctactcgttccgattgatggg
aaagtaagagtggtacctaaaaaaggtagtatgttccgatttgaatttcccgcttatgct
ccttcacccgaaaatgattttccaacaaacaccatcaattctcatctaaccacttcttcg
aaacaaacgatttcccatccatcgtcatcttctttcatcttggacgaaggggagacatca
gctatgcaacgtcggatgggtaacgaatccacggagcagaaaaaggagtcggcagtagct
catgggatagagatttcagtaaatgaatcagtggagcagacggatattccatgggaacaa
aaacaaaaagcgttatatcaaccacccgaagctgatacaatggaacttcatctctccaac
ataaatttacctagaatacaaatagacattctgggtgataatttttgtcatagatcggta
gatcgagcaggaaggaaattccgacctactcaaatacctggaagtggatgggcagaggaa
catgttcgtttacctgtggaagaagggtttggggatcttatacgaaagttggaaagggag
gaaagggatagtggtcaggtcaagagtttgtcgagtgataggagaaatgggaaagagagg
agtaaggtgaaagttgtcggaaggagaaaaagagataaatcaagacgaaaagatccaccg
gcttggggaaagtatgaaccttttgtttaa
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