Tremella mesenterica: TREMEDRAFT_63874
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Entry
TREMEDRAFT_63874 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
tms
Tremella mesenterica
Pathway
tms04136
Autophagy - other
tms04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
TREMEDRAFT_63874
04136 Autophagy - other
TREMEDRAFT_63874
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tms01002
]
TREMEDRAFT_63874
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_63874
03029 Mitochondrial biogenesis [BR:
tms03029
]
TREMEDRAFT_63874
Peptidases and inhibitors [BR:
tms01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
TREMEDRAFT_63874
Membrane trafficking [BR:
tms04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
TREMEDRAFT_63874
Mitochondrial biogenesis [BR:
tms03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
TREMEDRAFT_63874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
18496426
NCBI-ProteinID:
XP_007006183
JGI:
Treme1_63874
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MPTLHTTTSPTSSSTSSSHASSSTHNIPTINIHPSRPHPNLPPPPPPDRLPPPKGRSLGA
ASRKGLKLRKKDREPLTNIIGKEGDEEEGWTLEGHVANGQHQSGRPSESLDRLSPMEKDQ
PLFDSQLTEVPPKEKRPSKGRALVKKTSQLFSRDRNRDRSGEGDSSGAVTPNSFTSINAL
DQRQTSYSSVTSNDSHSTTHSSFRIPANQPRPTSGGSRTRSPPPPPHAGHARRRSHDSQT
SWTATSMSIRSRSSSIQDSNFEQLHPIPQRQMSSFSASVPTLSRQALPQPAPPGQRSTEN
FPTRMSTWFSHLLPSSSSSAVADSSSGSANGGPSGNPPSPARKQQSAAASFLNAARQKAV
DGVRHLLDSEAQPDKCPDTIWVLGVGHPGWRPSTPTGRPLPLPPDPSVEERRMNSGTSNK
LSPHTKHDAGLRPTAWTRRSKDPTSSTSPQKSITNLFSSSTLSLALPSTGSPSREGDPPS
DSPGKAKKDKKEREVLRWPDQFYDDFKSRVWCTYRSQYAPILYIPHELLIPTPEAYYSAF
GPPADMTVDLSRQSSATLPSLPSRPSTSPWNWARSEERGLTTDAGWGCMLRTGQSLLANA
LIHLHLGRDWRVPSQPQVPPTSAAHLAELEAYSSYVRILSWFLDDPSPLCPFSVHRIALI
GKELGKEVGEWFGPSTAAGALKTLVNSFPPSGMAVATAVDSIVYKSDVYSASNLQSTGWS
DESAPPRRQSSSSRSSTSWGNRAVLVLIGIRLGLDGVNPLYYESIKALFTFPQSVGIAGG
RPSSSYYFVGTQANSLVYLDPHFTRPAVPLQVPPAASPKVEIPINPDYLPVEDQEEVVIV
DSPSKTMSPDAKYKLDVVDVDDMSDSESDSSSPTQARHQRTVRPARRLSVNNHSDPLPSG
LPQAIPTSNRVHETSSGLEDPFLASASTPRKASPTRAPTSPQQKSELAVEPQAAWYATAY
SKAQLGTFHCDKVRKIPLSGLDPSMLLGFVCKDEADFEDFCSRVAQLPQKIFTIQEEPPC
WGEGDDAGFESVSSGPDVSEPTLSDEAEVAELSEDIAAARLSASFDPPKEIANGVKDMTL
PDQKKEGLTKKEDLEDEPTIIPLPPPMSTGMLVEKPSMGFGETQEDRSVKDKGMGEDVKR
PRMTRKRTESWVDAMVEES
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgccaactcttcacaccaccacttcccccacttcttcatccacatcttcttcacacgca
tcttcctctactcataacatacccacgataaatatccatccatcgcgaccacacccaaac
ttaccaccgcctcctccaccagatcgtcttccacccccaaaaggccgctcgctcggtgcg
gcctctcgcaaaggcttgaagctgcgcaaaaaggatcgtgaacctctcaccaacatcatc
gggaaagagggagacgaggaagagggatggacgctggaaggacatgtcgcaaatggtcaa
caccagagtggtcggccaagtgaaagtttggaccgtctttcacctatggaaaaagatcaa
ccgctgttcgactctcaactgaccgaagtacctcccaaagaaaagagaccctctaaggga
cgagcgttggtgaagaagacttcgcagctcttctcaagagacaggaacagggatcggtcg
ggggaaggagattcttccggtgctgtgacgccgaatagtttcacgtccataaatgcgctt
gatcaaagacaaacttcgtattcttcggtgacatccaacgactcgcattccactacccac
agctctttccgtataccagcaaatcaacctcgacccacttctggtggatccagaacgcgg
tcgcctcccccgcctcctcatgccggccatgctcgacgccgttcccatgattcacagaca
tcttggacggctacctcaatgtctataagatcacgatcatcatccattcaagattccaac
ttcgaacaacttcatccaatccctcagagacaaatgtcaagcttcagtgcgtcagttcct
accttgtcccgacaagctcttccgcagcctgcgcctcctggacaaagatcgactgaaaat
ttcccgactcgcatgtccacctggttctcccatctccttccttcgtcctcctcgtccgcc
gtcgcggatagctcgagtgggtcagccaatggaggtccatccggtaatcctccttctccc
gctcggaaacaacaatcagccgccgcaagcttcctcaatgcagcaaggcaaaaagctgtc
gatggtgtgcgacatcttcttgactctgaggcccagccagacaaatgccccgatacgata
tgggtcttgggcgtgggtcatcctggctggcgaccatcgacgccgaccggccgtccgcta
cctttgcccccagatccatctgttgaggaaagacggatgaactctgggacctcaaacaaa
ctttctccacacaccaagcatgatgctggcttacgacccacggcttggacgagaaggtcc
aaggacccaacatcctccacatctccgcagaaatcaataaccaatctcttttcctcttcg
actttatctctggctcttccttctaccggttcaccgagcagagaaggagatccgccttcg
gatagcccagggaaggcgaagaaagataagaaggaaagagaggtcctgagatggccagat
caattctatgacgatttcaagtcacgtgtgtggtgtacatatcgctcacaatacgcacca
atcctgtacatacctcacgaactcttgattcctacccctgaggcgtactactctgcattc
ggtccgccagcggatatgacggtagacctctctcggcaatcttccgccacccttccatct
cttccttcgcgaccatcgacctccccgtggaattgggctcggtcggaggagagaggcttg
acgacggatgccggttggggatgcatgctgagaactgggcaaagcttattggcaaacgcc
ttgatacatttacatctcggtcgagattggcgagtgccttcccaacctcaagttccaccg
acctcagcggcacacctagccgagctcgaagcttatagctcatatgtccggattttgtct
tggttcctggacgatccgtcacccttgtgccctttcagtgtgcatcgtattgcgctcatc
ggtaaagaattgggcaaagaggtgggggagtggttcggacccagtactgcagcaggagcc
ctgaaaacgctggtcaactcgtttcctccctctggcatggcggtcgcgacggccgttgac
agtattgtctacaagtctgatgtgtattccgcttccaacctacaatccaccgggtggtca
gacgagtctgcaccgccacggcgccagtcgtcgtccagtcgctcttcgacttcctgggga
aatagagccgtcctcgtccttattggtatacgactaggattggatggtgtcaatcctctg
tactacgaatccatcaaagctcttttcaccttccctcaatctgtagggatcgcaggcgga
agaccgtcttcttcatattactttgttgggacacaagccaattccttggtttatcttgac
cctcacttcactcgtcctgcggtcccgttacaggttccacctgctgcatccccaaaagtg
gagatacctatcaatcctgactatttgccggtggaggatcaagaagaggtggtcattgtt
gattctcccagcaaaacaatgtccccagatgccaagtacaaactcgacgttgtggacgtg
gacgatatgtctgattcggagagcgattcgtcctctcctactcaagcgagacatcaacgg
actgtccgacctgctcgacggctgagtgtcaataatcacagtgaccctttaccatctgga
ttacctcaagctatccctacttcaaaccgtgttcacgaaacgtcctctggtcttgaagac
ccattcctcgcgtctgcctccaccccacgaaaagcttctccaacaagagctcctacctct
ccgcaacagaaatcggagttggcggtcgagcctcaggcggcatggtacgctacggcatac
tccaaggctcaactgggaacgttccactgtgataaagttcggaaaataccattatctggc
ttagatcctagcatgttgctaggatttgtatgtaaagatgaagcggattttgaagatttc
tgctctcgtgtcgctcagcttcctcagaagatcttcacgatacaagaagaacccccttgc
tggggtgaaggcgacgatgcgggtttcgaatccgtttcttctgggcctgatgtatccgaa
ccaactttatcagacgaagcggaggtggcagagctttcagaggacattgctgccgctcga
ctctcagcctcattcgaccctcccaaagaaattgccaacggtgtcaaagacatgaccctg
cctgatcagaagaaagaggggttaacgaaaaaggaagatctggaagatgaaccgaccata
atacctttacccccgcccatgagtacaggtatgttggtcgagaaaccaagcatgggtttc
ggggaaactcaagaggatcggtcagtgaaagacaaggggatgggagaagatgtgaaaaga
ccacgaatgacgagaaaaaggacggaatcttgggtcgacgccatggttgaagagtcttaa
DBGET
integrated database retrieval system
