Tremella mesenterica: TREMEDRAFT_64621
Help
Entry
TREMEDRAFT_64621 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K23719
nuclear mRNA export protein SAC3
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_64621
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
TREMEDRAFT_64621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
18496756
NCBI-ProteinID:
XP_007006863
JGI:
Treme1_64621
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
MANLTALESGNPDSDDESRKASRLAARAARFSQKLPGNRYKELEEMRAKQRKAFEQSGQI
KTGKIELEDAVDMRGTCETMCSEYEREFREYTREVHPFEAGPSKRIDPQKAVAAYSRSDA
GAGHGDSAILPSDLRTPQTLVVVMLIQPPLTGATSSYSRARKALGYSAGFIRDRTRAIRK
EFAMQSSWGHEEAINSYERIARWHILCLRELQEETGTNTDMHIDSAELGRCFTSLRQQYN
DRREETGLEMPCPNEPEFRAYMLIFDLAHKSVSIPIAELPQVILDHPLVKIAWNIRNTAQ
RNFDSQKEGSKLNAELGSNLITQYVRLLKDKRVPFLLACLVEIRLREMRRSALRSLNRTY
PRLRTEPIRVNEAGEVVERKMVLISTLEQLLGCEEQESEDSAWDDVERGDGKPSTEVVEI
VQRFGLEVYNGPQGPIGALINSGAPFNGEIQKAYNKDAPYTKRWKLITAKNPSASYVDIV
NGLAGVQVEGGRSYHSLPTIVVPPTRTQPPVVTHFNFGPITTPKKSPPKSTFNFLSTAST
ALALPPSITTPSQAPSFPLLPSATSAKLPPTIAPSNKAPQFNFKFTPATPLPPPSASPAP
LFTQPGLFSNLSQSAGTTITSLRSPPKSLLATSQPPAAPPVKSDPIPTHTQIISTRVVSR
KSGLSPTERQRRLDTAPTLSSDLISEVIDRLLDNSRPMFRKILKQELAAREYSTAKNLRK
EKIEDWSRDIFSMIHEEIVYDICKQAILVEIGKRAMLRRTLRHWKRWARRKRLLREDAER
QRQEAFDRLSIMGVGPSGSMIGWSDGLATPLTENGELPGERKDEFEIDMALHQSLISIFT
AEDIAFKSQLMEVSTRAVFCVGIDEQVEKTKDQFYTPSTFFHSIARYVAPLLNPSKTPTT
MTAFTIQQQLPDRPLSQWRTILSSAKQSGSPPPDEAERWLAGKLLPRLSNEFEYEGIIFD
AVKVDRYDPPSGEYTGLVVFEVPLRTNDEGQIDGNVGDAQDRMTGLVYLANRGQGAYIPS
LLLVTWETESLDEVCDRLDIREDVRSFQNVQILSLESAENVDISFQQCLTRLFPSVTIRE
KIELSHAEAVNAMLPSWERFLQAVQVLLSTRPMDVGLILNSFGLGVNALMELSKILTSMT
KVSLEITKLPSFRADGEDVLLCPTSLPEAPTLLRLLSLFASPPSHYYLPFAPGPRIRFTC
RSAVENIADYVSQEVFNGLDEINLLVPPLRHAAQRGQALPVPELLHAIALVVFAELNDDT
SPLIMIPTTKMPNKRVVLSSLANRYASYMDEVISHIAQFPATLLTSSTSSSSRPTDESLR
SSSSQHLPSPSRYPSPSFETHSLTSSPTYPNIPRKTAPSSPPQSFPLSSSSPMIGQMGMG
TKRPRESSSPLKQKRRESKALKKAKLLRAMAEVSRTLGEMEIAL
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctcaccgctctcgagtctggtaacccggatagcgatgatgagtcgagaaaa
gctagtagactggctgctagggccgccaggttcagtcagaagctcccagggaataggtat
aaagagctcgaggaaatgagagccaaacaacgtaaagcattcgaacagtctggtcagata
aaaacaggaaagatcgaacttgaagatgctgttgacatgcgtggaacttgtgagaccatg
tgttcggaatacgaacgagaattccgagaatatacccgtgaagtgcaccctttcgaagct
ggtcccagtaagagaatcgaccctcaaaaggccgtagcggcgtattcgaggtctgacgca
ggtgctggacatggtgattcagctatattaccatcagaccttcgtacacctcaaactctg
gtggtagtcatgttgattcaaccaccattgactggtgcgacctcgtcttactctcgagca
agaaaagcacttggatactctgcgggattcatccgcgaccgaacaagagctatcaggaaa
gaatttgccatgcagagttcgtggggtcatgaagaagctatcaacagttatgaacgtatt
gctcgttggcatatactttgtctacgagaattgcaagaggagacaggaaccaataccgat
atgcacatcgattcagccgaattaggaagatgtttcacatctctcagacaacaatataac
gatcgacgagaagagacaggtttggaaatgccttgtccaaacgaaccggaattccgtgca
tatatgctcatatttgatctcgcacataaatccgtctccattcccattgcagaattacca
caagtgatcttagatcatcccctcgtcaagatcgcttggaacatacgaaataccgctcaa
agaaacttcgactcacaaaaagaaggtagcaagctcaatgccgagttaggatcgaatctc
atcactcaatatgtgcgtttgctcaaggacaaaagggtcccgttcctcttggcttgtctg
gtggagatacgtttgagggaaatgcgacgaagtgccttgagatcattgaataggacatat
ccgagattacggacggaacctatacgagtgaatgaagctggtgaggttgtggagagaaag
atggttttgataagtactttggaacagttattaggatgtgaagaacaggaaagtgaagat
tccgcttgggatgatgtggagagaggtgatggtaaacctagcacggaagtcgttgagata
gtgcagagatttggtctggaggtgtataacggcccgcaaggacctattggagctctgata
aattcaggtgctcctttcaacggtgagattcaaaaagcatataataaggatgctccttat
acgaaaagatggaagttgattactgccaagaatccctctgcgagctatgtggacattgtg
aatggtcttgccggagtacaggttgagggcggacggtcttatcattctctaccaacaatt
gtcgttcctccgacacggacccaacctcctgttgtgacccacttcaattttggccccatc
acaacgcccaagaaaagtcccccgaaatcaactttcaattttctctccaccgcctcgacc
gctctcgcccttcctccatcaattaccacaccttctcaagcaccctctttccctttactt
ccctcagccacttctgccaaactacccccgacaattgcaccctcgaataaagcaccgcaa
ttcaatttcaaattcaccccggctactcccctcccccctccctcagcatcaccagcaccc
ctcttcactcaacctggtttattttccaatctttcccaatccgctggaacgaccataacg
tcgctaaggtcgcctcccaaatccctcttggcaacatcacaaccaccagcagcccctcct
gtgaaatctgaccccattcctactcatacccaaatcatttcaactcgtgtggtcagtcga
aagtccggtctttcaccaacagaacgtcaacgccgtcttgacacagctcctacactctcc
tccgatctcatatcagaggtcatcgataggttactcgataactctcgtccaatgttccgt
aagatcttgaagcaagaacttgcagctcgagagtattcaacagctaaaaacctccggaag
gagaaaatcgaggactggtcacgggacattttttcaatgatccatgaggaaatcgtgtat
gatatatgcaaacaagccattttagttgagatcggtaagagggcgatgcttcgtaggact
ttgagacattggaaaaggtgggcgagacgtaagagactattgagagaagatgcggaaagg
cagagacaggaggcatttgatagactgagcattatgggcgtaggaccgtcagggtcgatg
attggttggagcgatggtttagcgacgcctttgactgaaaatggggaattgccaggtgag
agaaaggacgagtttgaaattgatatggctttgcatcagtccctaattagcatcttcacc
gcggaagatattgcttttaaatcgcagcttatggaggtctcgactcgtgcggtattctgt
gtcggtattgacgaacaggtggaaaagacgaaagatcaattctacactccctccactttc
ttccattccatcgctcgatacgtagctcctcttttgaacccgtccaaaacacctaccacc
atgacggcttttacgattcaacaacaactaccagatcgtcccttatcacaatggcgtacc
atcttatcgtcagccaaacaatctggtagtccaccaccagacgaagctgagcgttggttg
gccggtaaattactcccgagattgagtaacgaattcgaatatgagggaatcatctttgat
gctgtcaaagttgatcgatatgaccctccgtcgggggaatatacagggttggtagtgttt
gaagtcccgttacggactaatgacgagggacagattgatgggaatgtaggagatgcacaa
gacagaatgacaggtctagtctatctcgctaatagaggtcaaggagcatatataccttca
ttgttgttggtcacatgggagactgaatctttggatgaagtctgtgacaggttggacata
cgtgaggatgttagatcttttcaaaatgtacagatactctctttggaatctgcagagaat
gtcgatatttcctttcaacaatgtttgaccagattattcccttcggtaactataagggaa
aagatagagttgagtcatgctgaagccgtgaacgctatgttaccttcctgggaaaggttt
ctccaagctgttcaagttttactttctaccagaccgatggacgtgggattaattttgaac
agtttcggattgggtgtaaatgctttaatggagttatcaaagattctgacttcgatgact
aaggtttctttggagattaccaagttaccgtcttttcgagctgatggagaggatgttttg
ctttgccccacctctcttcctgaagcgcccacccttctccgactgttatcactctttgcc
tcacctccctcgcactactacctccccttcgcccctggtccacgaatcagattcacatgc
agatctgctgtggagaatatagccgactacgtttctcaggaggtgttcaacggattagac
gagattaaccttcttgttcctcctcttcggcatgctgctcaacgtggacaagcattaccc
gtccccgagttattacatgccattgcgttggtcgtctttgccgaattaaacgatgatact
tcccctctcatcatgatccccacgaccaaaatgcccaataaacgagtggtactttcctcc
ttggcaaatcggtatgcctcttacatggatgaggtaatctcccatatcgctcaattccct
gcaactcttttgacctcttcgacctcgtcatcgtcaagacccacagacgaatctttacga
tcgagttcatctcaacatttaccatcgccatcacgttacccatccccctcttttgagact
cattcactcacttcttccccaacttacccaaacattccgaggaagacagcaccatcatct
cctcctcaatccttccctctctcatcctcttcaccaatgataggtcagatgggaatgggc
acgaaacgaccccgagaatcatcatcacctttgaaacagaaacgaagggagagtaaagct
ttgaagaaggcaaagttgttacgggccatggcagaggttagtcggacgttgggtgagatg
gaaattgcgttgtag
DBGET
integrated database retrieval system
