Tremella mesenterica: TREMEDRAFT_65654
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Entry
TREMEDRAFT_65654 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K17302
coatomer subunit beta'
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_65654
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_65654
Membrane trafficking [BR:
tms04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
TREMEDRAFT_65654
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
TREMEDRAFT_65654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
PEP5_VPS11_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_LRRK2
TPR_GEMI5
PQQ
Motif
Other DBs
NCBI-GeneID:
18497235
NCBI-ProteinID:
XP_007007811
JGI:
Treme1_65654
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MPMLLDINRKLLARSDRVKSVDFHPTEPHVICGLYNGQVKIWNYETQTDLKTFEVTDVPV
RCVRYIARKNWFVSGSDDFQLRVYNISTGEKITSFEAHPDYIRCLTVHPTLSLVLTGSDD
MTVKCWDWDKGWRCVQIFEGHTHYIMALAINPKDPQTFASACLDHTVKVWSLGSPVPNFS
LEAHEKGVNYVDYYHGGDRPYLVTTGDDRLVKIWDYHAKSCVQVLESHTANVSFAIFHPS
LPILLSGSEDGTIKIWHSSTYRLENTLSYGLERAWCVAYRKTGNEVAVGFDEGAVVIKLG
RDEPAVSMDTSGKIVYARNTEILTANVSSLGVEGMSFLLDCISEFGSSPHLELEIVRSDA
IEDGQRIHVSLRDLGTTEVYPQSLQHSPNGRFVTVCGDGEYIIYTALAWRNKAFGPGTSF
AWAGDSNTYAIQEGKSKIRVYRAFKERPGFIKSSGTWAVEGVHGGTLLAARGSGFVMFWD
WETGAVVRRVEVDATGVSWSGSGNLVAITSEDTLYVLRFDRDAYLAAVDGGKVIGDEGVE
EAVELVAEISETVKTSRWVGDCFIYTNSTNRLSYLIGDQSHVINHFDQPVYLLGYLPTQN
RIYVADKDMNVYSYSLSLTVVEYQTAILRGDMEGAESLLPSIPPEQRNRIARFLEAQDLK
ELALSVSTDPDHRFDLSISLNDLDTALSLVRAAPEIGSQAKWKVVGDKALQAWQMDLAQE
AYEKASDLPSLLLLFSSLSDREGMERLAKLAKTKGQNNIAFAAYLQLGDAASCVSILTST
GRLSEAALLARSYQPVLMGGVVKEWKSQLEEEGRTKLAATLADPEEDVTLFEGLGLGGGK
SDGEGSGVMVDKPTEDEMEVEGEGEVKEEGVVEKVGNTIEGLVEKVQDLTVGNGDEPTSP
NETTEPAPEIEAEVEAAAENGTEVEKEVPSSKPQGKKKGGKKK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgttactagatatcaacagaaaattactagctagatcagatagagtcaaatcg
gtcgattttcatcctactgaacctcatgttatttgcggcctatacaacggtcaggtaaaa
atatggaactatgaaactcaaacggatctgaagacgttcgaagtgaccgacgttccagtg
agatgtgtgcggtacattgccaggaagaattggttcgtctctggctcggatgacttccaa
ctccgagtgtacaacatctccacgggcgagaaaatcacgtctttcgaagctcatccagac
tacataagatgtcttaccgttcaccctacgctcagtctcgttctcactggtagtgatgat
atgactgtgaaatgttgggattgggataagggatggagatgtgttcaaatcttcgaaggt
cacactcattatatcatggcgctggctatcaatccgaaagatccccaaaccttcgcttca
gcttgtctggatcatactgtcaaggtatggtctttgggtagccctgtgccaaacttcagt
ctggaggcacatgaaaagggggtcaattacgtggattattatcatggcggtgatcgaccg
tatcttgtcactacgggtgatgatcgacttgtgaaaatatgggattaccacgccaagtcc
tgcgtccaggttctcgaatctcacaccgccaacgtttctttcgccatcttccatccctcc
ttacccattctcctgtccggctctgaagacggtactatcaaaatatggcattcctccacg
tatcgcttggagaacactctgagctatggcctcgagagagcatggtgcgttgcctatcgt
aaaacgggcaatgaggtggctgtgggtttcgatgaaggtgcggtggtcatcaagcttggt
cgagacgagccagcagtgtcaatggacacatcaggcaagattgtatatgcccgtaacact
gagatccttacagcaaatgtatcatctcttggcgttgaaggtatgtctttccttttggat
tgtatctcggaatttggctcctctcctcacctcgagcttgagatcgtgagaagtgacgct
atcgaagacggtcaacgtatccatgtctccctgcgtgatctcggtaccactgaagtctac
ccgcaatccctccaacattccccaaacggtcgtttcgtgactgtatgtggcgatggggaa
tacatcatttacaccgctctcgcatggcgcaataaagccttcggtcctggtacttccttc
gcttgggccggcgactcaaacacttatgccatccaagaaggtaaatcgaaaatccgagtg
tatcgagcgtttaaagaacgtcctgggttcatcaaatcttctggtacgtgggccgtagag
ggtgtgcatggaggcactttgctggctgctagaggaagtggtttcgtcatgttctgggat
tgggaaactggagctgtggtgcgcagggtcgaagtggacgcaacgggagtaagctggagt
ggtagtggaaacttggtggcgattacaagtgaggatacgttgtatgttttgagatttgat
agggatgcgtatttggcggcggtggacggtgggaaggtcattggggatgagggggtggaa
gaggcggtagaattggtggcggagatttcggagacggtcaagacctcacgatgggtcgga
gattgtttcatctacactaactcgaccaacagactgagttatctcataggtgatcagtct
catgtcatcaatcacttcgatcaacccgtttacctcttgggctacctgccaactcaaaat
cggatctacgtagcggacaaagacatgaacgtctattcttattcactttccttgacggtg
gtggagtatcagactgctatattgcgaggggacatggaaggggcagaatctctcttgcca
agtataccacccgagcagaggaatagaatagcaaggttcttggaagctcaagatcttaaa
gaactcgctctcagtgtctctaccgatcccgatcatcgattcgacctttccatctcgctc
aacgatctcgacactgctctatcactcgtccgtgctgctccagaaatcggttctcaggct
aaatggaaagtcgtcggtgacaaagctctccaagcttggcagatggacctagctcaagaa
gcctacgagaaagcctctgatcttccctctctcctccttcttttctcctctctctctgat
agagaaggaatggaacgtcttgccaaactagcgaaaacaaaaggtcaaaataatatcgct
tttgccgcttatttgcaattgggtgatgcggcaagttgtgtctccattctcacttccacc
ggcagattatcagaagctgcattgttagcgagaagttatcaacctgttctcatgggtggt
gtagtgaaagaatggaaatctcaattggaggaagaaggaaggacgaaattagctgctact
ttggcagatccggaagaagatgtgacgttgtttgaggggttggggttgggtgggggaaag
agtgatggagagggtagtggagttatggttgataaacctacggaagatgagatggaggtg
gaaggtgagggggaagtgaaggaagaaggggtggtggagaaggtaggtaatacgatagag
ggtttagtggagaaggtacaggatttgactgtgggaaatggggatgaaccgacctcccca
aatgaaaccaccgaaccggcgcccgaaatagaggcagaggttgaagcggcagcggaaaat
ggtacagaggtcgaaaaagaagtcccatcttctaaaccacaaggaaagaagaaaggtgga
aagaagaagtag
DBGET
integrated database retrieval system
